Protein–RNA interactions for Protein: Q96B97

SH3KBP1, SH3 domain-containing kinase-binding protein 1, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3KBP1Q96B97 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
SH3KBP1Q96B97 AC006455.2-201ENST00000429931 906 ntBASIC21.83■■□□□ 1.09
SH3KBP1Q96B97 AP001330.3-201ENST00000520123 633 ntBASIC21.83■■□□□ 1.09
SH3KBP1Q96B97 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
SH3KBP1Q96B97 MIR3181-201ENST00000578512 73 ntBASIC21.83■■□□□ 1.09
SH3KBP1Q96B97 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC21.83■■□□□ 1.09
SH3KBP1Q96B97 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
SH3KBP1Q96B97 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
SH3KBP1Q96B97 DUSP8P5-201ENST00000422884 1815 ntBASIC21.83■■□□□ 1.08
SH3KBP1Q96B97 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SH3KBP1Q96B97 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SH3KBP1Q96B97 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC21.82■■□□□ 1.08
SH3KBP1Q96B97 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SH3KBP1Q96B97 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
SH3KBP1Q96B97 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
SH3KBP1Q96B97 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
SH3KBP1Q96B97 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SH3KBP1Q96B97 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
SH3KBP1Q96B97 AC027682.1-201ENST00000562846 899 ntBASIC21.82■■□□□ 1.08
SH3KBP1Q96B97 AC133561.1-201ENST00000568600 2415 ntBASIC21.82■■□□□ 1.08
SH3KBP1Q96B97 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC21.82■■□□□ 1.08
SH3KBP1Q96B97 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
SH3KBP1Q96B97 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SH3KBP1Q96B97 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
SH3KBP1Q96B97 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
SH3KBP1Q96B97 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC21.82■■□□□ 1.08
SH3KBP1Q96B97 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SH3KBP1Q96B97 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
SH3KBP1Q96B97 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
SH3KBP1Q96B97 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
SH3KBP1Q96B97 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC21.81■■□□□ 1.08
SH3KBP1Q96B97 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SH3KBP1Q96B97 FP325331.1-202ENST00000623531 1380 ntBASIC21.81■■□□□ 1.08
SH3KBP1Q96B97 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SH3KBP1Q96B97 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SH3KBP1Q96B97 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SH3KBP1Q96B97 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SH3KBP1Q96B97 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
SH3KBP1Q96B97 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
SH3KBP1Q96B97 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
SH3KBP1Q96B97 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SH3KBP1Q96B97 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC21.8■■□□□ 1.08
SH3KBP1Q96B97 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
SH3KBP1Q96B97 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC21.8■■□□□ 1.08
SH3KBP1Q96B97 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SH3KBP1Q96B97 RASA4CP-201ENST00000424092 1398 ntBASIC21.8■■□□□ 1.08
SH3KBP1Q96B97 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SH3KBP1Q96B97 GUK1-205ENST00000366722 850 ntTSL 3 BASIC21.8■■□□□ 1.08
SH3KBP1Q96B97 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SH3KBP1Q96B97 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC21.8■■□□□ 1.08
SH3KBP1Q96B97 pRNA.6-201ENST00000610482 90 ntBASIC21.8■■□□□ 1.08
SH3KBP1Q96B97 pRNA.5-201ENST00000612139 90 ntBASIC21.8■■□□□ 1.08
SH3KBP1Q96B97 pRNA.11-201ENST00000618423 90 ntBASIC21.8■■□□□ 1.08
SH3KBP1Q96B97 pRNA.13-201ENST00000619112 90 ntBASIC21.8■■□□□ 1.08
SH3KBP1Q96B97 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC21.8■■□□□ 1.08
SH3KBP1Q96B97 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SH3KBP1Q96B97 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SH3KBP1Q96B97 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SH3KBP1Q96B97 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SH3KBP1Q96B97 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SH3KBP1Q96B97 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
SH3KBP1Q96B97 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SH3KBP1Q96B97 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SH3KBP1Q96B97 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC21.79■■□□□ 1.08
SH3KBP1Q96B97 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
SH3KBP1Q96B97 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC21.79■■□□□ 1.08
SH3KBP1Q96B97 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC21.79■■□□□ 1.08
SH3KBP1Q96B97 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SH3KBP1Q96B97 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC21.79■■□□□ 1.08
SH3KBP1Q96B97 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SH3KBP1Q96B97 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
SH3KBP1Q96B97 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
SH3KBP1Q96B97 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
SH3KBP1Q96B97 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
SH3KBP1Q96B97 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
SH3KBP1Q96B97 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SH3KBP1Q96B97 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
SH3KBP1Q96B97 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SH3KBP1Q96B97 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC21.78■■□□□ 1.08
SH3KBP1Q96B97 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC21.78■■□□□ 1.08
SH3KBP1Q96B97 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC21.78■■□□□ 1.08
SH3KBP1Q96B97 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SH3KBP1Q96B97 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC21.78■■□□□ 1.08
SH3KBP1Q96B97 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC21.78■■□□□ 1.08
SH3KBP1Q96B97 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SH3KBP1Q96B97 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
SH3KBP1Q96B97 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC21.77■■□□□ 1.08
SH3KBP1Q96B97 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
SH3KBP1Q96B97 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SH3KBP1Q96B97 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SH3KBP1Q96B97 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SH3KBP1Q96B97 ZNRF2P3-201ENST00000424200 374 ntBASIC21.77■■□□□ 1.08
SH3KBP1Q96B97 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
SH3KBP1Q96B97 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SH3KBP1Q96B97 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SH3KBP1Q96B97 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
SH3KBP1Q96B97 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SH3KBP1Q96B97 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SH3KBP1Q96B97 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
SH3KBP1Q96B97 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 62.8 ms