Protein–RNA interactions for Protein: Q8IWY4

SCUBE1, Signal peptide, CUB and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE1Q8IWY4 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SCUBE1Q8IWY4 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SCUBE1Q8IWY4 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
SCUBE1Q8IWY4 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC21.78■■□□□ 1.08
SCUBE1Q8IWY4 OR2A1-AS1-204ENST00000470435 602 ntBASIC21.78■■□□□ 1.08
SCUBE1Q8IWY4 KRT125P-201ENST00000546827 989 ntBASIC21.78■■□□□ 1.08
SCUBE1Q8IWY4 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SCUBE1Q8IWY4 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
SCUBE1Q8IWY4 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SCUBE1Q8IWY4 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SCUBE1Q8IWY4 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SCUBE1Q8IWY4 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SCUBE1Q8IWY4 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
SCUBE1Q8IWY4 H19-210ENST00000439725 1929 ntTSL 2 BASIC21.77■■□□□ 1.08
SCUBE1Q8IWY4 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
SCUBE1Q8IWY4 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
SCUBE1Q8IWY4 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC21.77■■□□□ 1.08
SCUBE1Q8IWY4 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC21.77■■□□□ 1.08
SCUBE1Q8IWY4 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SCUBE1Q8IWY4 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC21.77■■□□□ 1.07
SCUBE1Q8IWY4 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC21.77■■□□□ 1.07
SCUBE1Q8IWY4 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.07
SCUBE1Q8IWY4 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC21.76■■□□□ 1.07
SCUBE1Q8IWY4 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SCUBE1Q8IWY4 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SCUBE1Q8IWY4 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SCUBE1Q8IWY4 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC21.76■■□□□ 1.07
SCUBE1Q8IWY4 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SCUBE1Q8IWY4 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SCUBE1Q8IWY4 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
SCUBE1Q8IWY4 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC21.75■■□□□ 1.07
SCUBE1Q8IWY4 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SCUBE1Q8IWY4 LBH-205ENST00000407930 756 ntTSL 2 BASIC21.75■■□□□ 1.07
SCUBE1Q8IWY4 SENP5-202ENST00000419026 973 ntTSL 3 BASIC21.75■■□□□ 1.07
SCUBE1Q8IWY4 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC21.75■■□□□ 1.07
SCUBE1Q8IWY4 MIR4787-201ENST00000607364 84 ntBASIC21.75■■□□□ 1.07
SCUBE1Q8IWY4 BID-212ENST00000614949 1988 ntTSL 5 BASIC21.75■■□□□ 1.07
SCUBE1Q8IWY4 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
SCUBE1Q8IWY4 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
SCUBE1Q8IWY4 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SCUBE1Q8IWY4 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SCUBE1Q8IWY4 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC21.74■■□□□ 1.07
SCUBE1Q8IWY4 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SCUBE1Q8IWY4 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SCUBE1Q8IWY4 TK2-202ENST00000417693 1046 ntTSL 2 BASIC21.74■■□□□ 1.07
SCUBE1Q8IWY4 GUSBP5-201ENST00000418136 578 ntBASIC21.74■■□□□ 1.07
SCUBE1Q8IWY4 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC21.74■■□□□ 1.07
SCUBE1Q8IWY4 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC21.74■■□□□ 1.07
SCUBE1Q8IWY4 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
SCUBE1Q8IWY4 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC21.74■■□□□ 1.07
SCUBE1Q8IWY4 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC21.74■■□□□ 1.07
SCUBE1Q8IWY4 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SCUBE1Q8IWY4 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SCUBE1Q8IWY4 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC21.73■■□□□ 1.07
SCUBE1Q8IWY4 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
SCUBE1Q8IWY4 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SCUBE1Q8IWY4 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC21.73■■□□□ 1.07
SCUBE1Q8IWY4 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
SCUBE1Q8IWY4 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC21.73■■□□□ 1.07
SCUBE1Q8IWY4 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SCUBE1Q8IWY4 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC21.72■■□□□ 1.07
SCUBE1Q8IWY4 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
SCUBE1Q8IWY4 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC21.72■■□□□ 1.07
SCUBE1Q8IWY4 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SCUBE1Q8IWY4 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
SCUBE1Q8IWY4 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC21.72■■□□□ 1.07
SCUBE1Q8IWY4 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SCUBE1Q8IWY4 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SCUBE1Q8IWY4 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
SCUBE1Q8IWY4 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC21.72■■□□□ 1.07
SCUBE1Q8IWY4 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC21.72■■□□□ 1.07
SCUBE1Q8IWY4 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC21.72■■□□□ 1.07
SCUBE1Q8IWY4 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SCUBE1Q8IWY4 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC21.72■■□□□ 1.07
SCUBE1Q8IWY4 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SCUBE1Q8IWY4 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SCUBE1Q8IWY4 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SCUBE1Q8IWY4 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
SCUBE1Q8IWY4 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC21.71■■□□□ 1.07
SCUBE1Q8IWY4 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC21.71■■□□□ 1.07
SCUBE1Q8IWY4 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SCUBE1Q8IWY4 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SCUBE1Q8IWY4 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
SCUBE1Q8IWY4 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC21.71■■□□□ 1.07
SCUBE1Q8IWY4 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC21.71■■□□□ 1.07
SCUBE1Q8IWY4 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
SCUBE1Q8IWY4 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SCUBE1Q8IWY4 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC21.71■■□□□ 1.07
SCUBE1Q8IWY4 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC21.71■■□□□ 1.07
SCUBE1Q8IWY4 AL161729.1-201ENST00000604104 1402 ntBASIC21.71■■□□□ 1.07
SCUBE1Q8IWY4 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SCUBE1Q8IWY4 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC21.71■■□□□ 1.07
SCUBE1Q8IWY4 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.07
SCUBE1Q8IWY4 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC21.7■■□□□ 1.07
SCUBE1Q8IWY4 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC21.7■■□□□ 1.06
SCUBE1Q8IWY4 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SCUBE1Q8IWY4 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC21.7■■□□□ 1.06
SCUBE1Q8IWY4 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SCUBE1Q8IWY4 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SCUBE1Q8IWY4 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 139.2 ms