Protein–RNA interactions for Protein: P47100

TY1B-JR2, Transposon Ty1-JR2 Gag-Pol polyprotein, yeastyeast

Known RBP Predictions only

Length 1,755 aa.

Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1B-JR2P47100 PAP1YKR002W 1707 nt5.04□□□□□ -1.6
TY1B-JR2P47100 PAN5YHR063C 1140 nt5.04□□□□□ -1.6
TY1B-JR2P47100 SUE1YPR151C 621 nt5.04□□□□□ -1.6
TY1B-JR2P47100 YMR317WYMR317W 3423 nt5.03□□□□□ -1.6
TY1B-JR2P47100 SHO1YER118C 1104 nt5.03□□□□□ -1.6
TY1B-JR2P47100 IRC18YJL037W 675 nt5.03□□□□□ -1.6
TY1B-JR2P47100 YJL218WYJL218W 591 nt5.03□□□□□ -1.6
TY1B-JR2P47100 ARR1YPR199C 885 nt5.03□□□□□ -1.6
TY1B-JR2P47100 tK(UUU)DtK(UUU)D 73 nt5.02□□□□□ -1.61
TY1B-JR2P47100 tK(UUU)G1tK(UUU)G1 73 nt5.02□□□□□ -1.61
TY1B-JR2P47100 tK(UUU)G2tK(UUU)G2 73 nt5.02□□□□□ -1.61
TY1B-JR2P47100 tK(UUU)KtK(UUU)K 73 nt5.02□□□□□ -1.61
TY1B-JR2P47100 tK(UUU)LtK(UUU)L 73 nt5.02□□□□□ -1.61
TY1B-JR2P47100 tK(UUU)OtK(UUU)O 73 nt5.02□□□□□ -1.61
TY1B-JR2P47100 tK(UUU)PtK(UUU)P 73 nt5.02□□□□□ -1.61
TY1B-JR2P47100 NRM1YNR009W 750 nt5.02□□□□□ -1.61
TY1B-JR2P47100 snR42snR42 351 nt5.02□□□□□ -1.61
TY1B-JR2P47100 INO80YGL150C 4470 nt5.02□□□□□ -1.61
TY1B-JR2P47100 RSE1YML049C 4086 nt5.02□□□□□ -1.61
TY1B-JR2P47100 CDC26YFR036W 375 nt5.01□□□□□ -1.61
TY1B-JR2P47100 YLR156WYLR156W 345 nt5.01□□□□□ -1.61
TY1B-JR2P47100 YLR159WYLR159W 345 nt5.01□□□□□ -1.61
TY1B-JR2P47100 YLR161WYLR161W 345 nt5.01□□□□□ -1.61
TY1B-JR2P47100 NAT3YPR131C 588 nt5.01□□□□□ -1.61
TY1B-JR2P47100 NOP4YPL043W 2058 nt5.01□□□□□ -1.61
TY1B-JR2P47100 UPS3YDR185C 540 nt5.01□□□□□ -1.61
TY1B-JR2P47100 UBA2YDR390C 1911 nt5.01□□□□□ -1.61
TY1B-JR2P47100 SPT15YER148W 723 nt5□□□□□ -1.61
TY1B-JR2P47100 ECM34YHL043W 513 nt5□□□□□ -1.61
TY1B-JR2P47100 IRC9YJL142C 393 nt5□□□□□ -1.61
TY1B-JR2P47100 YBL039W-BYBL039W-B 180 nt5□□□□□ -1.61
TY1B-JR2P47100 MDM12YOL009C 816 nt5□□□□□ -1.61
TY1B-JR2P47100 TCB2YNL087W 3537 nt5□□□□□ -1.61
TY1B-JR2P47100 UTP9YHR196W 1728 nt5□□□□□ -1.61
TY1B-JR2P47100 AIM17YHL021C 1398 nt5□□□□□ -1.61
TY1B-JR2P47100 YKL050CYKL050C 2769 nt4.99□□□□□ -1.61
TY1B-JR2P47100 FAD1YDL045C 921 nt4.99□□□□□ -1.61
TY1B-JR2P47100 NKP1YDR383C 717 nt4.99□□□□□ -1.61
TY1B-JR2P47100 RPL8BYLL045C 771 nt4.99□□□□□ -1.61
TY1B-JR2P47100 ELM1YKL048C 1923 nt4.99□□□□□ -1.61
TY1B-JR2P47100 KIC1YHR102W 3243 nt4.99□□□□□ -1.61
TY1B-JR2P47100 PCA1YBR295W 3651 nt4.99□□□□□ -1.61
TY1B-JR2P47100 RPL34AYER056C-A 366 nt4.99□□□□□ -1.61
TY1B-JR2P47100 MRP13YGR084C 1020 nt4.99□□□□□ -1.61
TY1B-JR2P47100 YPT7YML001W 627 nt4.99□□□□□ -1.61
TY1B-JR2P47100 YND1YER005W 1893 nt4.98□□□□□ -1.61
TY1B-JR2P47100 GAC1YOR178C 2382 nt4.98□□□□□ -1.61
TY1B-JR2P47100 RAD53YPL153C 2466 nt4.98□□□□□ -1.61
TY1B-JR2P47100 BMH2YDR099W 822 nt4.98□□□□□ -1.61
TY1B-JR2P47100 YGR053CYGR053C 852 nt4.98□□□□□ -1.61
TY1B-JR2P47100 BUB1YGR188C 3066 nt4.98□□□□□ -1.61
TY1B-JR2P47100 YIL054WYIL054W 318 nt4.97□□□□□ -1.61
TY1B-JR2P47100 GOT1YMR292W 417 nt4.97□□□□□ -1.61
TY1B-JR2P47100 YNL320WYNL320W 855 nt4.97□□□□□ -1.61
TY1B-JR2P47100 UTP23YOR004W 765 nt4.97□□□□□ -1.61
TY1B-JR2P47100 YOR387CYOR387C 621 nt4.97□□□□□ -1.61
TY1B-JR2P47100 DUR1,2YBR208C 5508 nt4.96□□□□□ -1.61
TY1B-JR2P47100 TRP4YDR354W 1143 nt4.96□□□□□ -1.61
TY1B-JR2P47100 TMA10YLR327C 261 nt4.96□□□□□ -1.61
TY1B-JR2P47100 VMA1YDL185W 3216 nt4.96□□□□□ -1.62
TY1B-JR2P47100 HAL5YJL165C 2568 nt4.96□□□□□ -1.62
TY1B-JR2P47100 MED7YOL135C 669 nt4.96□□□□□ -1.62
TY1B-JR2P47100 YBR126W-AYBR126W-A 207 nt4.96□□□□□ -1.62
TY1B-JR2P47100 RHO3YIL118W 696 nt4.95□□□□□ -1.62
TY1B-JR2P47100 MED4YOR174W 855 nt4.95□□□□□ -1.62
TY1B-JR2P47100 PHM8YER037W 966 nt4.94□□□□□ -1.62
TY1B-JR2P47100 SMC3YJL074C 3693 nt4.94□□□□□ -1.62
TY1B-JR2P47100 PRP40YKL012W 1752 nt4.94□□□□□ -1.62
TY1B-JR2P47100 ATG11YPR049C 3537 nt4.94□□□□□ -1.62
TY1B-JR2P47100 SRO7YPR032W 3102 nt4.94□□□□□ -1.62
TY1B-JR2P47100 ORC1YML065W 2745 nt4.93□□□□□ -1.62
TY1B-JR2P47100 MEC3YLR288C 1425 nt4.93□□□□□ -1.62
TY1B-JR2P47100 APC11YDL008W 498 nt4.93□□□□□ -1.62
TY1B-JR2P47100 MRPL11YDL202W 750 nt4.93□□□□□ -1.62
TY1B-JR2P47100 tQ(UUG)BtQ(UUG)B 72 nt4.93□□□□□ -1.62
TY1B-JR2P47100 MOT2YER068W 1764 nt4.93□□□□□ -1.62
TY1B-JR2P47100 UBP13YBL067C 2244 nt4.92□□□□□ -1.62
TY1B-JR2P47100 HAT2YEL056W 1206 nt4.92□□□□□ -1.62
TY1B-JR2P47100 YRA2YKL214C 612 nt4.92□□□□□ -1.62
TY1B-JR2P47100 YHL026CYHL026C 948 nt4.91□□□□□ -1.62
TY1B-JR2P47100 PBP2YBR233W 1242 nt4.91□□□□□ -1.62
TY1B-JR2P47100 YHR202WYHR202W 1809 nt4.91□□□□□ -1.62
TY1B-JR2P47100 SET5YHR207C 1581 nt4.91□□□□□ -1.62
TY1B-JR2P47100 SWP82YFL049W 1872 nt4.9□□□□□ -1.62
TY1B-JR2P47100 TAH18YPR048W 1872 nt4.9□□□□□ -1.62
TY1B-JR2P47100 YGR125WYGR125W 3111 nt4.9□□□□□ -1.62
TY1B-JR2P47100 MLH2YLR035C 2088 nt4.9□□□□□ -1.63
TY1B-JR2P47100 YHL034W-AYHL034W-A 462 nt4.9□□□□□ -1.63
TY1B-JR2P47100 DNA2YHR164C 4569 nt4.89□□□□□ -1.63
TY1B-JR2P47100 NUP60YAR002W 1620 nt4.89□□□□□ -1.63
TY1B-JR2P47100 RPL30YGL030W 318 nt4.89□□□□□ -1.63
TY1B-JR2P47100 YKL033W-AYKL033W-A 711 nt4.89□□□□□ -1.63
TY1B-JR2P47100 ARO4YBR249C 1113 nt4.89□□□□□ -1.63
TY1B-JR2P47100 URA7YBL039C 1740 nt4.89□□□□□ -1.63
TY1B-JR2P47100 ENA2YDR039C 3276 nt4.89□□□□□ -1.63
TY1B-JR2P47100 ENA1YDR040C 3276 nt4.89□□□□□ -1.63
TY1B-JR2P47100 PIR1YKL164C 1026 nt4.88□□□□□ -1.63
TY1B-JR2P47100 INN1YNL152W 1230 nt4.88□□□□□ -1.63
TY1B-JR2P47100 MDR1YGR100W 2853 nt4.88□□□□□ -1.63
TY1B-JR2P47100 NTO1YPR031W 2247 nt4.88□□□□□ -1.63
Retrieved 100 of 7,029 protein–RNA pairs in 90.9 ms