Protein–RNA interactions for Protein: O60931

CTNS, Cystinosin, humanhuman

Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNSO60931 PTMA-205ENST00000410064 814 ntTSL 2 BASIC20.8■□□□□ 0.92
CTNSO60931 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC20.8■□□□□ 0.92
CTNSO60931 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC20.8■□□□□ 0.92
CTNSO60931 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CTNSO60931 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CTNSO60931 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CTNSO60931 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CTNSO60931 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC20.79■□□□□ 0.92
CTNSO60931 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CTNSO60931 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CTNSO60931 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC20.79■□□□□ 0.92
CTNSO60931 CASK-201ENST00000378154 2494 ntTSL 5 BASIC20.79■□□□□ 0.92
CTNSO60931 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CTNSO60931 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC20.78■□□□□ 0.92
CTNSO60931 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CTNSO60931 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CTNSO60931 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CTNSO60931 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC20.78■□□□□ 0.92
CTNSO60931 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC20.78■□□□□ 0.92
CTNSO60931 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC20.78■□□□□ 0.92
CTNSO60931 AC133561.4-201ENST00000566112 224 ntBASIC20.78■□□□□ 0.92
CTNSO60931 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC20.78■□□□□ 0.92
CTNSO60931 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CTNSO60931 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CTNSO60931 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CTNSO60931 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CTNSO60931 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CTNSO60931 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
CTNSO60931 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CTNSO60931 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
CTNSO60931 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
CTNSO60931 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC20.77■□□□□ 0.92
CTNSO60931 MTURN-203ENST00000409688 843 ntTSL 2 BASIC20.77■□□□□ 0.92
CTNSO60931 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CTNSO60931 MIR4767-201ENST00000582827 78 ntBASIC20.77■□□□□ 0.92
CTNSO60931 AC004687.1-201ENST00000579003 1625 ntBASIC20.77■□□□□ 0.92
CTNSO60931 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC20.77■□□□□ 0.91
CTNSO60931 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC20.77■□□□□ 0.91
CTNSO60931 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC20.77■□□□□ 0.91
CTNSO60931 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
CTNSO60931 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
CTNSO60931 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC20.77■□□□□ 0.91
CTNSO60931 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC20.76■□□□□ 0.91
CTNSO60931 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
CTNSO60931 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
CTNSO60931 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CTNSO60931 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CTNSO60931 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
CTNSO60931 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC20.76■□□□□ 0.91
CTNSO60931 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CTNSO60931 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC20.76■□□□□ 0.91
CTNSO60931 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CTNSO60931 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CTNSO60931 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CTNSO60931 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CTNSO60931 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CTNSO60931 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CTNSO60931 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
CTNSO60931 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CTNSO60931 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CTNSO60931 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC20.75■□□□□ 0.91
CTNSO60931 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC20.75■□□□□ 0.91
CTNSO60931 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC20.75■□□□□ 0.91
CTNSO60931 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CTNSO60931 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC20.75■□□□□ 0.91
CTNSO60931 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
CTNSO60931 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC20.75■□□□□ 0.91
CTNSO60931 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CTNSO60931 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
CTNSO60931 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CTNSO60931 EDA-201ENST00000338901 1233 ntBASIC20.74■□□□□ 0.91
CTNSO60931 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CTNSO60931 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CTNSO60931 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CTNSO60931 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
CTNSO60931 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC20.74■□□□□ 0.91
CTNSO60931 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC20.74■□□□□ 0.91
CTNSO60931 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC20.74■□□□□ 0.91
CTNSO60931 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CTNSO60931 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CTNSO60931 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
CTNSO60931 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CTNSO60931 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC20.73■□□□□ 0.91
CTNSO60931 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
CTNSO60931 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC20.73■□□□□ 0.91
CTNSO60931 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC20.73■□□□□ 0.91
CTNSO60931 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CTNSO60931 GCA-201ENST00000233612 1694 ntTSL 2 BASIC20.73■□□□□ 0.91
CTNSO60931 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CTNSO60931 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC20.72■□□□□ 0.91
CTNSO60931 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC20.72■□□□□ 0.91
CTNSO60931 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CTNSO60931 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC20.72■□□□□ 0.91
CTNSO60931 OR2I1P-207ENST00000453522 948 ntBASIC20.72■□□□□ 0.91
CTNSO60931 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC20.72■□□□□ 0.91
CTNSO60931 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC20.72■□□□□ 0.91
CTNSO60931 AL355001.2-201ENST00000620617 1191 ntBASIC20.72■□□□□ 0.91
CTNSO60931 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
CTNSO60931 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CTNSO60931 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms