Protein–RNA interactions for Protein: A0A087WUM0

SYNJ2BP-COX16, SYNJ2BP-COX16 readthrough (Fragment), humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNJ2BP-COX16A0A087WUM0 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
SYNJ2BP-COX16A0A087WUM0 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC23.18■■□□□ 1.3
SYNJ2BP-COX16A0A087WUM0 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
SYNJ2BP-COX16A0A087WUM0 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
SYNJ2BP-COX16A0A087WUM0 MIR3181-201ENST00000578512 73 ntBASIC23.17■■□□□ 1.3
SYNJ2BP-COX16A0A087WUM0 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
SYNJ2BP-COX16A0A087WUM0 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC23.17■■□□□ 1.3
SYNJ2BP-COX16A0A087WUM0 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC23.17■■□□□ 1.3
SYNJ2BP-COX16A0A087WUM0 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC23.17■■□□□ 1.3
SYNJ2BP-COX16A0A087WUM0 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC23.16■■□□□ 1.3
SYNJ2BP-COX16A0A087WUM0 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC23.16■■□□□ 1.3
SYNJ2BP-COX16A0A087WUM0 DUX4L19-201ENST00000557448 1267 ntBASIC23.16■■□□□ 1.3
SYNJ2BP-COX16A0A087WUM0 AL136162.1-201ENST00000607711 1078 ntBASIC23.16■■□□□ 1.3
SYNJ2BP-COX16A0A087WUM0 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC23.16■■□□□ 1.3
SYNJ2BP-COX16A0A087WUM0 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC23.16■■□□□ 1.3
SYNJ2BP-COX16A0A087WUM0 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
SYNJ2BP-COX16A0A087WUM0 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
SYNJ2BP-COX16A0A087WUM0 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
SYNJ2BP-COX16A0A087WUM0 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC23.15■■□□□ 1.3
SYNJ2BP-COX16A0A087WUM0 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
SYNJ2BP-COX16A0A087WUM0 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC23.15■■□□□ 1.3
SYNJ2BP-COX16A0A087WUM0 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
SYNJ2BP-COX16A0A087WUM0 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC23.15■■□□□ 1.3
SYNJ2BP-COX16A0A087WUM0 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC23.15■■□□□ 1.3
SYNJ2BP-COX16A0A087WUM0 AC110285.6-201ENST00000617652 491 ntBASIC23.15■■□□□ 1.3
SYNJ2BP-COX16A0A087WUM0 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
SYNJ2BP-COX16A0A087WUM0 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC23.15■■□□□ 1.3
SYNJ2BP-COX16A0A087WUM0 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
SYNJ2BP-COX16A0A087WUM0 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
SYNJ2BP-COX16A0A087WUM0 AC004687.1-201ENST00000579003 1625 ntBASIC23.15■■□□□ 1.3
SYNJ2BP-COX16A0A087WUM0 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
SYNJ2BP-COX16A0A087WUM0 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
SYNJ2BP-COX16A0A087WUM0 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
SYNJ2BP-COX16A0A087WUM0 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC23.14■■□□□ 1.3
SYNJ2BP-COX16A0A087WUM0 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC23.14■■□□□ 1.3
SYNJ2BP-COX16A0A087WUM0 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC23.14■■□□□ 1.29
SYNJ2BP-COX16A0A087WUM0 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC23.14■■□□□ 1.29
SYNJ2BP-COX16A0A087WUM0 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
SYNJ2BP-COX16A0A087WUM0 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
SYNJ2BP-COX16A0A087WUM0 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC23.14■■□□□ 1.29
SYNJ2BP-COX16A0A087WUM0 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC23.14■■□□□ 1.29
SYNJ2BP-COX16A0A087WUM0 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC23.14■■□□□ 1.29
SYNJ2BP-COX16A0A087WUM0 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC23.13■■□□□ 1.29
SYNJ2BP-COX16A0A087WUM0 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
SYNJ2BP-COX16A0A087WUM0 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
SYNJ2BP-COX16A0A087WUM0 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC23.13■■□□□ 1.29
SYNJ2BP-COX16A0A087WUM0 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
SYNJ2BP-COX16A0A087WUM0 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
SYNJ2BP-COX16A0A087WUM0 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
SYNJ2BP-COX16A0A087WUM0 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC23.13■■□□□ 1.29
SYNJ2BP-COX16A0A087WUM0 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
SYNJ2BP-COX16A0A087WUM0 PBX2P1-201ENST00000493219 1291 ntBASIC23.13■■□□□ 1.29
SYNJ2BP-COX16A0A087WUM0 AC024257.2-201ENST00000549699 147 ntBASIC23.13■■□□□ 1.29
SYNJ2BP-COX16A0A087WUM0 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC23.13■■□□□ 1.29
SYNJ2BP-COX16A0A087WUM0 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
SYNJ2BP-COX16A0A087WUM0 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
SYNJ2BP-COX16A0A087WUM0 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC23.13■■□□□ 1.29
SYNJ2BP-COX16A0A087WUM0 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC23.13■■□□□ 1.29
SYNJ2BP-COX16A0A087WUM0 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
SYNJ2BP-COX16A0A087WUM0 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
SYNJ2BP-COX16A0A087WUM0 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
SYNJ2BP-COX16A0A087WUM0 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
SYNJ2BP-COX16A0A087WUM0 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC23.12■■□□□ 1.29
SYNJ2BP-COX16A0A087WUM0 AC133637.1-201ENST00000624115 1537 ntBASIC23.12■■□□□ 1.29
SYNJ2BP-COX16A0A087WUM0 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC23.12■■□□□ 1.29
SYNJ2BP-COX16A0A087WUM0 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
SYNJ2BP-COX16A0A087WUM0 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
SYNJ2BP-COX16A0A087WUM0 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
SYNJ2BP-COX16A0A087WUM0 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
SYNJ2BP-COX16A0A087WUM0 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
SYNJ2BP-COX16A0A087WUM0 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC23.11■■□□□ 1.29
SYNJ2BP-COX16A0A087WUM0 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC23.11■■□□□ 1.29
SYNJ2BP-COX16A0A087WUM0 HES6-206ENST00000409574 738 ntTSL 2 BASIC23.11■■□□□ 1.29
SYNJ2BP-COX16A0A087WUM0 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
SYNJ2BP-COX16A0A087WUM0 RALB-208ENST00000631312 311 ntTSL 5 BASIC23.11■■□□□ 1.29
SYNJ2BP-COX16A0A087WUM0 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
SYNJ2BP-COX16A0A087WUM0 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC23.11■■□□□ 1.29
SYNJ2BP-COX16A0A087WUM0 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
SYNJ2BP-COX16A0A087WUM0 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
SYNJ2BP-COX16A0A087WUM0 AC135279.3-201ENST00000610945 1311 ntBASIC23.1■■□□□ 1.29
SYNJ2BP-COX16A0A087WUM0 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
SYNJ2BP-COX16A0A087WUM0 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC23.1■■□□□ 1.29
SYNJ2BP-COX16A0A087WUM0 RARA-203ENST00000394086 2008 ntTSL 2 BASIC23.1■■□□□ 1.29
SYNJ2BP-COX16A0A087WUM0 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
SYNJ2BP-COX16A0A087WUM0 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
SYNJ2BP-COX16A0A087WUM0 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC23.1■■□□□ 1.29
SYNJ2BP-COX16A0A087WUM0 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC23.1■■□□□ 1.29
SYNJ2BP-COX16A0A087WUM0 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC23.1■■□□□ 1.29
SYNJ2BP-COX16A0A087WUM0 AL499627.2-201ENST00000606283 725 ntBASIC23.1■■□□□ 1.29
SYNJ2BP-COX16A0A087WUM0 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
SYNJ2BP-COX16A0A087WUM0 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
SYNJ2BP-COX16A0A087WUM0 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC23.1■■□□□ 1.29
SYNJ2BP-COX16A0A087WUM0 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
SYNJ2BP-COX16A0A087WUM0 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC23.1■■□□□ 1.29
SYNJ2BP-COX16A0A087WUM0 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC23.1■■□□□ 1.29
SYNJ2BP-COX16A0A087WUM0 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC23.1■■□□□ 1.29
SYNJ2BP-COX16A0A087WUM0 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
SYNJ2BP-COX16A0A087WUM0 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC23.09■■□□□ 1.29
SYNJ2BP-COX16A0A087WUM0 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
SYNJ2BP-COX16A0A087WUM0 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms