Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC20.5■□□□□ 0.87
POLR2J3Q9H1A7 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
POLR2J3Q9H1A7 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
POLR2J3Q9H1A7 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
POLR2J3Q9H1A7 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC20.49■□□□□ 0.87
POLR2J3Q9H1A7 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC20.49■□□□□ 0.87
POLR2J3Q9H1A7 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC20.49■□□□□ 0.87
POLR2J3Q9H1A7 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
POLR2J3Q9H1A7 AC242852.2-201ENST00000615738 1807 ntBASIC20.49■□□□□ 0.87
POLR2J3Q9H1A7 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
POLR2J3Q9H1A7 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
POLR2J3Q9H1A7 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
POLR2J3Q9H1A7 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC20.49■□□□□ 0.87
POLR2J3Q9H1A7 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
POLR2J3Q9H1A7 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
POLR2J3Q9H1A7 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
POLR2J3Q9H1A7 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
POLR2J3Q9H1A7 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
POLR2J3Q9H1A7 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
POLR2J3Q9H1A7 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
POLR2J3Q9H1A7 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC20.48■□□□□ 0.87
POLR2J3Q9H1A7 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
POLR2J3Q9H1A7 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
POLR2J3Q9H1A7 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC20.48■□□□□ 0.87
POLR2J3Q9H1A7 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
POLR2J3Q9H1A7 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC20.48■□□□□ 0.87
POLR2J3Q9H1A7 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC20.48■□□□□ 0.87
POLR2J3Q9H1A7 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
POLR2J3Q9H1A7 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
POLR2J3Q9H1A7 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
POLR2J3Q9H1A7 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
POLR2J3Q9H1A7 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
POLR2J3Q9H1A7 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC20.47■□□□□ 0.87
POLR2J3Q9H1A7 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
POLR2J3Q9H1A7 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC20.47■□□□□ 0.87
POLR2J3Q9H1A7 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC20.47■□□□□ 0.87
POLR2J3Q9H1A7 AL353803.4-201ENST00000565882 1934 ntBASIC20.47■□□□□ 0.87
POLR2J3Q9H1A7 AC137767.1-201ENST00000602918 1920 ntBASIC20.47■□□□□ 0.87
POLR2J3Q9H1A7 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC20.47■□□□□ 0.87
POLR2J3Q9H1A7 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC20.47■□□□□ 0.87
POLR2J3Q9H1A7 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
POLR2J3Q9H1A7 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
POLR2J3Q9H1A7 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
POLR2J3Q9H1A7 AC144652.1-201ENST00000609974 1624 ntBASIC20.47■□□□□ 0.87
POLR2J3Q9H1A7 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC20.47■□□□□ 0.87
POLR2J3Q9H1A7 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC20.47■□□□□ 0.87
POLR2J3Q9H1A7 AL031848.2-201ENST00000607670 837 ntBASIC20.47■□□□□ 0.87
POLR2J3Q9H1A7 MIR6722-201ENST00000617286 78 ntBASIC20.47■□□□□ 0.87
POLR2J3Q9H1A7 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC20.47■□□□□ 0.87
POLR2J3Q9H1A7 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC20.47■□□□□ 0.87
POLR2J3Q9H1A7 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
POLR2J3Q9H1A7 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC20.47■□□□□ 0.87
POLR2J3Q9H1A7 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
POLR2J3Q9H1A7 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
POLR2J3Q9H1A7 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
POLR2J3Q9H1A7 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
POLR2J3Q9H1A7 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC20.46■□□□□ 0.87
POLR2J3Q9H1A7 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
POLR2J3Q9H1A7 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC20.46■□□□□ 0.87
POLR2J3Q9H1A7 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC20.46■□□□□ 0.87
POLR2J3Q9H1A7 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC20.46■□□□□ 0.87
POLR2J3Q9H1A7 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC20.46■□□□□ 0.87
POLR2J3Q9H1A7 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
POLR2J3Q9H1A7 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC20.46■□□□□ 0.87
POLR2J3Q9H1A7 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
POLR2J3Q9H1A7 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
POLR2J3Q9H1A7 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
POLR2J3Q9H1A7 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
POLR2J3Q9H1A7 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.45■□□□□ 0.86
POLR2J3Q9H1A7 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
POLR2J3Q9H1A7 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
POLR2J3Q9H1A7 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC20.45■□□□□ 0.86
POLR2J3Q9H1A7 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
POLR2J3Q9H1A7 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
POLR2J3Q9H1A7 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
POLR2J3Q9H1A7 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
POLR2J3Q9H1A7 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC20.44■□□□□ 0.86
POLR2J3Q9H1A7 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
POLR2J3Q9H1A7 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC20.44■□□□□ 0.86
POLR2J3Q9H1A7 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
POLR2J3Q9H1A7 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
POLR2J3Q9H1A7 SENP5-202ENST00000419026 973 ntTSL 3 BASIC20.44■□□□□ 0.86
POLR2J3Q9H1A7 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC20.44■□□□□ 0.86
POLR2J3Q9H1A7 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC20.44■□□□□ 0.86
POLR2J3Q9H1A7 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC20.44■□□□□ 0.86
POLR2J3Q9H1A7 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
POLR2J3Q9H1A7 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
POLR2J3Q9H1A7 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
POLR2J3Q9H1A7 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
POLR2J3Q9H1A7 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC20.44■□□□□ 0.86
POLR2J3Q9H1A7 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
POLR2J3Q9H1A7 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
POLR2J3Q9H1A7 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC20.43■□□□□ 0.86
POLR2J3Q9H1A7 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC20.43■□□□□ 0.86
POLR2J3Q9H1A7 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
POLR2J3Q9H1A7 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC20.43■□□□□ 0.86
POLR2J3Q9H1A7 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
POLR2J3Q9H1A7 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
POLR2J3Q9H1A7 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
POLR2J3Q9H1A7 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 91.6 ms