Protein–RNA interactions for Protein: Q8TDI0

CHD5, Chromodomain-helicase-DNA-binding protein 5, humanhuman

Predictions only

Length 1,954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD5Q8TDI0 AL136162.1-201ENST00000607711 1078 ntBASIC22.68■■□□□ 1.22
CHD5Q8TDI0 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC22.68■■□□□ 1.22
CHD5Q8TDI0 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CHD5Q8TDI0 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC22.67■■□□□ 1.22
CHD5Q8TDI0 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC22.67■■□□□ 1.22
CHD5Q8TDI0 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
CHD5Q8TDI0 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC22.67■■□□□ 1.22
CHD5Q8TDI0 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC22.67■■□□□ 1.22
CHD5Q8TDI0 DUSP8P5-201ENST00000422884 1815 ntBASIC22.67■■□□□ 1.22
CHD5Q8TDI0 EDA-201ENST00000338901 1233 ntBASIC22.67■■□□□ 1.22
CHD5Q8TDI0 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC22.67■■□□□ 1.22
CHD5Q8TDI0 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
CHD5Q8TDI0 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
CHD5Q8TDI0 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC22.67■■□□□ 1.22
CHD5Q8TDI0 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CHD5Q8TDI0 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC22.67■■□□□ 1.22
CHD5Q8TDI0 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC22.67■■□□□ 1.22
CHD5Q8TDI0 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC22.67■■□□□ 1.22
CHD5Q8TDI0 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CHD5Q8TDI0 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CHD5Q8TDI0 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
CHD5Q8TDI0 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
CHD5Q8TDI0 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC22.66■■□□□ 1.22
CHD5Q8TDI0 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
CHD5Q8TDI0 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CHD5Q8TDI0 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC22.66■■□□□ 1.22
CHD5Q8TDI0 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC22.66■■□□□ 1.22
CHD5Q8TDI0 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CHD5Q8TDI0 MIR4767-201ENST00000582827 78 ntBASIC22.65■■□□□ 1.22
CHD5Q8TDI0 pRNA.6-201ENST00000610482 90 ntBASIC22.65■■□□□ 1.22
CHD5Q8TDI0 pRNA.5-201ENST00000612139 90 ntBASIC22.65■■□□□ 1.22
CHD5Q8TDI0 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC22.65■■□□□ 1.22
CHD5Q8TDI0 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC22.65■■□□□ 1.22
CHD5Q8TDI0 pRNA.11-201ENST00000618423 90 ntBASIC22.65■■□□□ 1.22
CHD5Q8TDI0 pRNA.13-201ENST00000619112 90 ntBASIC22.65■■□□□ 1.22
CHD5Q8TDI0 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CHD5Q8TDI0 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC22.65■■□□□ 1.22
CHD5Q8TDI0 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC22.65■■□□□ 1.22
CHD5Q8TDI0 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
CHD5Q8TDI0 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CHD5Q8TDI0 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
CHD5Q8TDI0 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC22.65■■□□□ 1.22
CHD5Q8TDI0 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.22
CHD5Q8TDI0 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
CHD5Q8TDI0 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC22.64■■□□□ 1.21
CHD5Q8TDI0 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
CHD5Q8TDI0 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC22.64■■□□□ 1.21
CHD5Q8TDI0 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC22.64■■□□□ 1.21
CHD5Q8TDI0 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC22.64■■□□□ 1.21
CHD5Q8TDI0 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
CHD5Q8TDI0 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC22.64■■□□□ 1.21
CHD5Q8TDI0 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC22.64■■□□□ 1.21
CHD5Q8TDI0 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC22.64■■□□□ 1.21
CHD5Q8TDI0 AC004687.1-201ENST00000579003 1625 ntBASIC22.64■■□□□ 1.21
CHD5Q8TDI0 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC22.63■■□□□ 1.21
CHD5Q8TDI0 OR2I1P-207ENST00000453522 948 ntBASIC22.63■■□□□ 1.21
CHD5Q8TDI0 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC22.63■■□□□ 1.21
CHD5Q8TDI0 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
CHD5Q8TDI0 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC22.63■■□□□ 1.21
CHD5Q8TDI0 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CHD5Q8TDI0 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC22.63■■□□□ 1.21
CHD5Q8TDI0 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC22.63■■□□□ 1.21
CHD5Q8TDI0 PBX2P1-201ENST00000493219 1291 ntBASIC22.63■■□□□ 1.21
CHD5Q8TDI0 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CHD5Q8TDI0 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC22.63■■□□□ 1.21
CHD5Q8TDI0 RALB-208ENST00000631312 311 ntTSL 5 BASIC22.63■■□□□ 1.21
CHD5Q8TDI0 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
CHD5Q8TDI0 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC22.63■■□□□ 1.21
CHD5Q8TDI0 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
CHD5Q8TDI0 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
CHD5Q8TDI0 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
CHD5Q8TDI0 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
CHD5Q8TDI0 AF213884.3-201ENST00000563833 479 ntBASIC22.62■■□□□ 1.21
CHD5Q8TDI0 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
CHD5Q8TDI0 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC22.62■■□□□ 1.21
CHD5Q8TDI0 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
CHD5Q8TDI0 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
CHD5Q8TDI0 RARA-203ENST00000394086 2008 ntTSL 2 BASIC22.62■■□□□ 1.21
CHD5Q8TDI0 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
CHD5Q8TDI0 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC22.62■■□□□ 1.21
CHD5Q8TDI0 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
CHD5Q8TDI0 MIR939-201ENST00000401314 82 ntBASIC22.61■■□□□ 1.21
CHD5Q8TDI0 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC22.61■■□□□ 1.21
CHD5Q8TDI0 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
CHD5Q8TDI0 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC22.61■■□□□ 1.21
CHD5Q8TDI0 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC22.61■■□□□ 1.21
CHD5Q8TDI0 GRAMD4P4-201ENST00000613563 1115 ntBASIC22.61■■□□□ 1.21
CHD5Q8TDI0 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC22.61■■□□□ 1.21
CHD5Q8TDI0 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
CHD5Q8TDI0 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC22.6■■□□□ 1.21
CHD5Q8TDI0 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
CHD5Q8TDI0 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
CHD5Q8TDI0 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
CHD5Q8TDI0 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
CHD5Q8TDI0 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC22.6■■□□□ 1.21
CHD5Q8TDI0 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC22.59■■□□□ 1.21
CHD5Q8TDI0 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
CHD5Q8TDI0 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC22.59■■□□□ 1.21
CHD5Q8TDI0 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC22.59■■□□□ 1.21
CHD5Q8TDI0 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 59.5 ms