Protein–RNA interactions for Protein: Q86YN6

PPARGC1B, Peroxisome proliferator-activated receptor gamma coactivator 1-beta, humanhuman

Known RBP Predictions only

Length 1,023 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1BQ86YN6 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC35.07■■■■□ 3.2
PPARGC1BQ86YN6 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC35.07■■■■□ 3.2
PPARGC1BQ86YN6 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC35.07■■■■□ 3.2
PPARGC1BQ86YN6 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC35.06■■■■□ 3.2
PPARGC1BQ86YN6 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC35.06■■■■□ 3.2
PPARGC1BQ86YN6 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC35.06■■■■□ 3.2
PPARGC1BQ86YN6 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC35.06■■■■□ 3.2
PPARGC1BQ86YN6 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC35.06■■■■□ 3.2
PPARGC1BQ86YN6 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC35.06■■■■□ 3.2
PPARGC1BQ86YN6 ASB1-202ENST00000409297 878 ntTSL 5 BASIC35.06■■■■□ 3.2
PPARGC1BQ86YN6 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC35.06■■■■□ 3.2
PPARGC1BQ86YN6 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC35.06■■■■□ 3.2
PPARGC1BQ86YN6 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC35.06■■■■□ 3.2
PPARGC1BQ86YN6 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC35.06■■■■□ 3.2
PPARGC1BQ86YN6 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC35.05■■■■□ 3.2
PPARGC1BQ86YN6 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC35.05■■■■□ 3.2
PPARGC1BQ86YN6 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC35.05■■■■□ 3.2
PPARGC1BQ86YN6 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC35.05■■■■□ 3.2
PPARGC1BQ86YN6 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC35.05■■■■□ 3.2
PPARGC1BQ86YN6 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC35.05■■■■□ 3.2
PPARGC1BQ86YN6 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC35.04■■■■□ 3.2
PPARGC1BQ86YN6 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC35.04■■■■□ 3.2
PPARGC1BQ86YN6 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC35.04■■■■□ 3.2
PPARGC1BQ86YN6 AL512631.2-201ENST00000604634 923 ntBASIC35.04■■■■□ 3.2
PPARGC1BQ86YN6 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC35.04■■■■□ 3.2
PPARGC1BQ86YN6 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC35.04■■■■□ 3.2
PPARGC1BQ86YN6 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC35.03■■■■□ 3.2
PPARGC1BQ86YN6 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC35.03■■■■□ 3.2
PPARGC1BQ86YN6 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC35.03■■■■□ 3.2
PPARGC1BQ86YN6 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC35.03■■■■□ 3.2
PPARGC1BQ86YN6 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC35.03■■■■□ 3.2
PPARGC1BQ86YN6 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC35.03■■■■□ 3.2
PPARGC1BQ86YN6 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC35.03■■■■□ 3.2
PPARGC1BQ86YN6 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC35.03■■■■□ 3.2
PPARGC1BQ86YN6 LINC00565-201ENST00000562710 2331 ntBASIC35.03■■■■□ 3.2
PPARGC1BQ86YN6 USP48-205ENST00000421625 2818 ntTSL 2 BASIC35.02■■■■□ 3.2
PPARGC1BQ86YN6 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC35.02■■■■□ 3.2
PPARGC1BQ86YN6 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC35.02■■■■□ 3.2
PPARGC1BQ86YN6 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC35.01■■■■□ 3.2
PPARGC1BQ86YN6 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC35.01■■■■□ 3.2
PPARGC1BQ86YN6 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC35.01■■■■□ 3.2
PPARGC1BQ86YN6 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC35.01■■■■□ 3.2
PPARGC1BQ86YN6 AC131281.2-201ENST00000520478 145 ntBASIC35.01■■■■□ 3.2
PPARGC1BQ86YN6 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC35.01■■■■□ 3.2
PPARGC1BQ86YN6 AL356740.2-201ENST00000601559 647 ntBASIC35.01■■■■□ 3.2
PPARGC1BQ86YN6 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC35.01■■■■□ 3.19
PPARGC1BQ86YN6 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC35.01■■■■□ 3.19
PPARGC1BQ86YN6 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC35.01■■■■□ 3.19
PPARGC1BQ86YN6 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC35.01■■■■□ 3.19
PPARGC1BQ86YN6 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC35■■■■□ 3.19
PPARGC1BQ86YN6 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC35■■■■□ 3.19
PPARGC1BQ86YN6 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC35■■■■□ 3.19
PPARGC1BQ86YN6 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC35■■■■□ 3.19
PPARGC1BQ86YN6 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC35■■■■□ 3.19
PPARGC1BQ86YN6 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC34.99■■■■□ 3.19
PPARGC1BQ86YN6 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC34.99■■■■□ 3.19
PPARGC1BQ86YN6 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC34.99■■■■□ 3.19
PPARGC1BQ86YN6 RPP21-222ENST00000433076 577 ntTSL 2 BASIC34.99■■■■□ 3.19
PPARGC1BQ86YN6 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC34.99■■■■□ 3.19
PPARGC1BQ86YN6 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC34.98■■■■□ 3.19
PPARGC1BQ86YN6 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC34.98■■■■□ 3.19
PPARGC1BQ86YN6 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC34.98■■■■□ 3.19
PPARGC1BQ86YN6 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC34.98■■■■□ 3.19
PPARGC1BQ86YN6 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC34.98■■■■□ 3.19
PPARGC1BQ86YN6 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC34.98■■■■□ 3.19
PPARGC1BQ86YN6 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC34.98■■■■□ 3.19
PPARGC1BQ86YN6 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC34.97■■■■□ 3.19
PPARGC1BQ86YN6 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC34.97■■■■□ 3.19
PPARGC1BQ86YN6 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC34.97■■■■□ 3.19
PPARGC1BQ86YN6 AL353803.4-201ENST00000565882 1934 ntBASIC34.97■■■■□ 3.19
PPARGC1BQ86YN6 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC34.97■■■■□ 3.19
PPARGC1BQ86YN6 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC34.97■■■■□ 3.19
PPARGC1BQ86YN6 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC34.97■■■■□ 3.19
PPARGC1BQ86YN6 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC34.97■■■■□ 3.19
PPARGC1BQ86YN6 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC34.97■■■■□ 3.19
PPARGC1BQ86YN6 EFS-203ENST00000429593 2610 ntTSL 2 BASIC34.97■■■■□ 3.19
PPARGC1BQ86YN6 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC34.97■■■■□ 3.19
PPARGC1BQ86YN6 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC34.97■■■■□ 3.19
PPARGC1BQ86YN6 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC34.96■■■■□ 3.19
PPARGC1BQ86YN6 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC34.96■■■■□ 3.19
PPARGC1BQ86YN6 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC34.96■■■■□ 3.19
PPARGC1BQ86YN6 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC34.96■■■■□ 3.19
PPARGC1BQ86YN6 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC34.96■■■■□ 3.19
PPARGC1BQ86YN6 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC34.96■■■■□ 3.19
PPARGC1BQ86YN6 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC34.96■■■■□ 3.19
PPARGC1BQ86YN6 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC34.95■■■■□ 3.19
PPARGC1BQ86YN6 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC34.95■■■■□ 3.19
PPARGC1BQ86YN6 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC34.94■■■■□ 3.18
PPARGC1BQ86YN6 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC34.94■■■■□ 3.18
PPARGC1BQ86YN6 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC34.94■■■■□ 3.18
PPARGC1BQ86YN6 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC34.94■■■■□ 3.18
PPARGC1BQ86YN6 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC34.94■■■■□ 3.18
PPARGC1BQ86YN6 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC34.94■■■■□ 3.18
PPARGC1BQ86YN6 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC34.93■■■■□ 3.18
PPARGC1BQ86YN6 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC34.93■■■■□ 3.18
PPARGC1BQ86YN6 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC34.93■■■■□ 3.18
PPARGC1BQ86YN6 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC34.93■■■■□ 3.18
PPARGC1BQ86YN6 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC34.93■■■■□ 3.18
PPARGC1BQ86YN6 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC34.93■■■■□ 3.18
PPARGC1BQ86YN6 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC34.93■■■■□ 3.18
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms