Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
PTCHD4Q6ZW05 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC20.38■□□□□ 0.85
PTCHD4Q6ZW05 STK32C-205ENST00000456004 607 ntTSL 2 BASIC20.38■□□□□ 0.85
PTCHD4Q6ZW05 AC010980.1-201ENST00000587192 1142 ntBASIC20.38■□□□□ 0.85
PTCHD4Q6ZW05 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC20.38■□□□□ 0.85
PTCHD4Q6ZW05 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PTCHD4Q6ZW05 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
PTCHD4Q6ZW05 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC20.38■□□□□ 0.85
PTCHD4Q6ZW05 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PTCHD4Q6ZW05 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC20.38■□□□□ 0.85
PTCHD4Q6ZW05 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PTCHD4Q6ZW05 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PTCHD4Q6ZW05 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PTCHD4Q6ZW05 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PTCHD4Q6ZW05 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
PTCHD4Q6ZW05 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PTCHD4Q6ZW05 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
PTCHD4Q6ZW05 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC20.37■□□□□ 0.85
PTCHD4Q6ZW05 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC20.37■□□□□ 0.85
PTCHD4Q6ZW05 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PTCHD4Q6ZW05 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PTCHD4Q6ZW05 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC20.37■□□□□ 0.85
PTCHD4Q6ZW05 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PTCHD4Q6ZW05 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
PTCHD4Q6ZW05 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC20.37■□□□□ 0.85
PTCHD4Q6ZW05 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
PTCHD4Q6ZW05 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PTCHD4Q6ZW05 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PTCHD4Q6ZW05 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
PTCHD4Q6ZW05 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
PTCHD4Q6ZW05 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
PTCHD4Q6ZW05 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
PTCHD4Q6ZW05 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PTCHD4Q6ZW05 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
PTCHD4Q6ZW05 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC20.36■□□□□ 0.85
PTCHD4Q6ZW05 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PTCHD4Q6ZW05 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC20.36■□□□□ 0.85
PTCHD4Q6ZW05 AC074183.2-201ENST00000623112 922 ntBASIC20.36■□□□□ 0.85
PTCHD4Q6ZW05 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
PTCHD4Q6ZW05 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PTCHD4Q6ZW05 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
PTCHD4Q6ZW05 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PTCHD4Q6ZW05 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
PTCHD4Q6ZW05 AF131216.4-201ENST00000638924 1588 ntBASIC20.35■□□□□ 0.85
PTCHD4Q6ZW05 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC20.35■□□□□ 0.85
PTCHD4Q6ZW05 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PTCHD4Q6ZW05 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC20.35■□□□□ 0.85
PTCHD4Q6ZW05 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PTCHD4Q6ZW05 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PTCHD4Q6ZW05 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.35■□□□□ 0.85
PTCHD4Q6ZW05 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PTCHD4Q6ZW05 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PTCHD4Q6ZW05 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PTCHD4Q6ZW05 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
PTCHD4Q6ZW05 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PTCHD4Q6ZW05 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
PTCHD4Q6ZW05 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PTCHD4Q6ZW05 GUK1-208ENST00000366728 842 ntTSL 2 BASIC20.34■□□□□ 0.85
PTCHD4Q6ZW05 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC20.34■□□□□ 0.85
PTCHD4Q6ZW05 LBH-205ENST00000407930 756 ntTSL 2 BASIC20.34■□□□□ 0.85
PTCHD4Q6ZW05 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PTCHD4Q6ZW05 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PTCHD4Q6ZW05 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PTCHD4Q6ZW05 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
PTCHD4Q6ZW05 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PTCHD4Q6ZW05 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC20.34■□□□□ 0.85
PTCHD4Q6ZW05 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC20.34■□□□□ 0.85
PTCHD4Q6ZW05 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC20.34■□□□□ 0.85
PTCHD4Q6ZW05 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC20.34■□□□□ 0.85
PTCHD4Q6ZW05 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC20.33■□□□□ 0.85
PTCHD4Q6ZW05 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC20.33■□□□□ 0.85
PTCHD4Q6ZW05 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PTCHD4Q6ZW05 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
PTCHD4Q6ZW05 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PTCHD4Q6ZW05 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
PTCHD4Q6ZW05 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PTCHD4Q6ZW05 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.33■□□□□ 0.85
PTCHD4Q6ZW05 AC079630.1-202ENST00000618127 1840 ntBASIC20.33■□□□□ 0.85
PTCHD4Q6ZW05 KRT18P24-201ENST00000344739 1156 ntBASIC20.33■□□□□ 0.85
PTCHD4Q6ZW05 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC20.33■□□□□ 0.85
PTCHD4Q6ZW05 MIR4281-201ENST00000580852 62 ntBASIC20.33■□□□□ 0.85
PTCHD4Q6ZW05 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.33■□□□□ 0.84
PTCHD4Q6ZW05 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
PTCHD4Q6ZW05 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
PTCHD4Q6ZW05 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PTCHD4Q6ZW05 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC20.32■□□□□ 0.84
PTCHD4Q6ZW05 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PTCHD4Q6ZW05 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC20.32■□□□□ 0.84
PTCHD4Q6ZW05 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC20.32■□□□□ 0.84
PTCHD4Q6ZW05 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PTCHD4Q6ZW05 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC20.32■□□□□ 0.84
PTCHD4Q6ZW05 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC20.32■□□□□ 0.84
PTCHD4Q6ZW05 THA1P-201ENST00000590384 1145 ntBASIC20.32■□□□□ 0.84
PTCHD4Q6ZW05 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
PTCHD4Q6ZW05 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC20.32■□□□□ 0.84
PTCHD4Q6ZW05 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PTCHD4Q6ZW05 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PTCHD4Q6ZW05 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PTCHD4Q6ZW05 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PTCHD4Q6ZW05 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 58.2 ms