Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SNX3O60493 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC21.95■■□□□ 1.1
SNX3O60493 AC092667.1-201ENST00000434301 2586 ntBASIC21.94■■□□□ 1.1
SNX3O60493 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
SNX3O60493 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC21.94■■□□□ 1.1
SNX3O60493 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SNX3O60493 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SNX3O60493 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
SNX3O60493 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
SNX3O60493 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
SNX3O60493 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
SNX3O60493 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC21.94■■□□□ 1.1
SNX3O60493 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
SNX3O60493 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC21.94■■□□□ 1.1
SNX3O60493 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC21.94■■□□□ 1.1
SNX3O60493 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
SNX3O60493 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
SNX3O60493 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC21.93■■□□□ 1.1
SNX3O60493 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
SNX3O60493 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC21.93■■□□□ 1.1
SNX3O60493 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
SNX3O60493 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC21.93■■□□□ 1.1
SNX3O60493 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC21.93■■□□□ 1.1
SNX3O60493 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC21.92■■□□□ 1.1
SNX3O60493 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC21.92■■□□□ 1.1
SNX3O60493 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC21.92■■□□□ 1.1
SNX3O60493 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
SNX3O60493 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC21.92■■□□□ 1.1
SNX3O60493 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC21.92■■□□□ 1.1
SNX3O60493 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
SNX3O60493 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
SNX3O60493 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
SNX3O60493 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
SNX3O60493 RAP2CP1-202ENST00000605179 643 ntBASIC21.92■■□□□ 1.1
SNX3O60493 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC21.92■■□□□ 1.1
SNX3O60493 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SNX3O60493 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SNX3O60493 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
SNX3O60493 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC21.91■■□□□ 1.1
SNX3O60493 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SNX3O60493 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
SNX3O60493 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SNX3O60493 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
SNX3O60493 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
SNX3O60493 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
SNX3O60493 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
SNX3O60493 AL353803.4-201ENST00000565882 1934 ntBASIC21.91■■□□□ 1.1
SNX3O60493 ECEL1P2-201ENST00000461596 1295 ntBASIC21.91■■□□□ 1.1
SNX3O60493 SSSCA1-AS1-201ENST00000567594 614 ntBASIC21.91■■□□□ 1.1
SNX3O60493 AC026202.3-201ENST00000600805 1127 ntBASIC21.91■■□□□ 1.1
SNX3O60493 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC21.91■■□□□ 1.1
SNX3O60493 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SNX3O60493 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC21.91■■□□□ 1.1
SNX3O60493 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SNX3O60493 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
SNX3O60493 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SNX3O60493 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC21.9■■□□□ 1.1
SNX3O60493 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
SNX3O60493 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SNX3O60493 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SNX3O60493 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC21.9■■□□□ 1.1
SNX3O60493 METRNL-202ENST00000570778 967 ntTSL 5 BASIC21.9■■□□□ 1.1
SNX3O60493 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC21.9■■□□□ 1.1
SNX3O60493 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SNX3O60493 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
SNX3O60493 AC131274.2-201ENST00000580697 1507 ntBASIC21.9■■□□□ 1.1
SNX3O60493 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
SNX3O60493 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
SNX3O60493 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
SNX3O60493 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
SNX3O60493 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
SNX3O60493 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
SNX3O60493 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
SNX3O60493 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
SNX3O60493 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
SNX3O60493 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
SNX3O60493 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
SNX3O60493 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
SNX3O60493 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
SNX3O60493 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SNX3O60493 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SNX3O60493 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
SNX3O60493 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC21.88■■□□□ 1.09
SNX3O60493 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC21.88■■□□□ 1.09
SNX3O60493 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SNX3O60493 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC21.88■■□□□ 1.09
SNX3O60493 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
SNX3O60493 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
SNX3O60493 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
SNX3O60493 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SNX3O60493 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
SNX3O60493 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC21.88■■□□□ 1.09
SNX3O60493 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
SNX3O60493 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
SNX3O60493 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC21.87■■□□□ 1.09
SNX3O60493 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
SNX3O60493 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
SNX3O60493 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SNX3O60493 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
SNX3O60493 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms