Protein–RNA interactions for Protein: Q9NX63

CHCHD3, MICOS complex subunit MIC19, humanhuman

Known RBP Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3Q9NX63 ZNRF2P2-203ENST00000454624 420 ntBASIC20.6■□□□□ 0.89
CHCHD3Q9NX63 AL157400.5-201ENST00000507624 621 ntBASIC20.6■□□□□ 0.89
CHCHD3Q9NX63 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CHCHD3Q9NX63 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CHCHD3Q9NX63 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CHCHD3Q9NX63 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CHCHD3Q9NX63 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CHCHD3Q9NX63 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CHCHD3Q9NX63 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC20.59■□□□□ 0.89
CHCHD3Q9NX63 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
CHCHD3Q9NX63 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CHCHD3Q9NX63 ANOS2P-203ENST00000472227 1816 ntBASIC20.59■□□□□ 0.89
CHCHD3Q9NX63 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CHCHD3Q9NX63 REST-210ENST00000638187 1334 ntTSL 5 BASIC20.58■□□□□ 0.89
CHCHD3Q9NX63 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CHCHD3Q9NX63 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CHCHD3Q9NX63 CR559946.2-201ENST00000623684 991 ntBASIC20.58■□□□□ 0.89
CHCHD3Q9NX63 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CHCHD3Q9NX63 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CHCHD3Q9NX63 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
CHCHD3Q9NX63 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC20.57■□□□□ 0.88
CHCHD3Q9NX63 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC20.57■□□□□ 0.88
CHCHD3Q9NX63 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC20.57■□□□□ 0.88
CHCHD3Q9NX63 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
CHCHD3Q9NX63 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CHCHD3Q9NX63 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CHCHD3Q9NX63 MOB2-207ENST00000614710 705 ntTSL 5 BASIC20.57■□□□□ 0.88
CHCHD3Q9NX63 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CHCHD3Q9NX63 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
CHCHD3Q9NX63 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CHCHD3Q9NX63 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC20.56■□□□□ 0.88
CHCHD3Q9NX63 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CHCHD3Q9NX63 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC20.56■□□□□ 0.88
CHCHD3Q9NX63 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CHCHD3Q9NX63 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CHCHD3Q9NX63 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CHCHD3Q9NX63 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC20.56■□□□□ 0.88
CHCHD3Q9NX63 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CHCHD3Q9NX63 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
CHCHD3Q9NX63 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CHCHD3Q9NX63 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC20.56■□□□□ 0.88
CHCHD3Q9NX63 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CHCHD3Q9NX63 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CHCHD3Q9NX63 AL158211.5-201ENST00000623583 2518 ntBASIC20.56■□□□□ 0.88
CHCHD3Q9NX63 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC20.56■□□□□ 0.88
CHCHD3Q9NX63 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CHCHD3Q9NX63 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC20.55■□□□□ 0.88
CHCHD3Q9NX63 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CHCHD3Q9NX63 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC20.55■□□□□ 0.88
CHCHD3Q9NX63 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CHCHD3Q9NX63 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
CHCHD3Q9NX63 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC20.55■□□□□ 0.88
CHCHD3Q9NX63 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CHCHD3Q9NX63 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CHCHD3Q9NX63 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CHCHD3Q9NX63 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CHCHD3Q9NX63 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
CHCHD3Q9NX63 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC20.55■□□□□ 0.88
CHCHD3Q9NX63 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
CHCHD3Q9NX63 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CHCHD3Q9NX63 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CHCHD3Q9NX63 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CHCHD3Q9NX63 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
CHCHD3Q9NX63 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CHCHD3Q9NX63 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
CHCHD3Q9NX63 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CHCHD3Q9NX63 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CHCHD3Q9NX63 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CHCHD3Q9NX63 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC20.54■□□□□ 0.88
CHCHD3Q9NX63 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
CHCHD3Q9NX63 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CHCHD3Q9NX63 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
CHCHD3Q9NX63 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CHCHD3Q9NX63 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC20.54■□□□□ 0.88
CHCHD3Q9NX63 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CHCHD3Q9NX63 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CHCHD3Q9NX63 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
CHCHD3Q9NX63 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CHCHD3Q9NX63 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
CHCHD3Q9NX63 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC20.53■□□□□ 0.88
CHCHD3Q9NX63 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC20.53■□□□□ 0.88
CHCHD3Q9NX63 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC20.53■□□□□ 0.88
CHCHD3Q9NX63 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CHCHD3Q9NX63 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
CHCHD3Q9NX63 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CHCHD3Q9NX63 AC092068.2-201ENST00000590491 1708 ntBASIC20.53■□□□□ 0.88
CHCHD3Q9NX63 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC20.53■□□□□ 0.88
CHCHD3Q9NX63 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC20.52■□□□□ 0.88
CHCHD3Q9NX63 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CHCHD3Q9NX63 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CHCHD3Q9NX63 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC20.52■□□□□ 0.88
CHCHD3Q9NX63 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CHCHD3Q9NX63 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
CHCHD3Q9NX63 RP9P-202ENST00000450133 1212 ntBASIC20.52■□□□□ 0.88
CHCHD3Q9NX63 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
CHCHD3Q9NX63 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CHCHD3Q9NX63 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
CHCHD3Q9NX63 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC20.52■□□□□ 0.88
CHCHD3Q9NX63 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CHCHD3Q9NX63 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC20.52■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms