Protein–RNA interactions for Protein: P25336

MSH3, DNA mismatch repair protein MSH3, yeastyeast

Predictions only

Length 1,018 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSH3P25336 AIM18YHR198C 966 nt6□□□□□ -1.45
MSH3P25336 SSY5YJL156C 2100 nt6□□□□□ -1.45
MSH3P25336 GAT3YLR013W 426 nt6□□□□□ -1.45
MSH3P25336 YLR379WYLR379W 375 nt6□□□□□ -1.45
MSH3P25336 INP1YMR204C 1263 nt6□□□□□ -1.45
MSH3P25336 snR37snR37 386 nt6□□□□□ -1.45
MSH3P25336 TEF1YPR080W 1377 nt6□□□□□ -1.45
MSH3P25336 TEF2YBR118W 1377 nt6□□□□□ -1.45
MSH3P25336 GAS5YOL030W 1455 nt6□□□□□ -1.45
MSH3P25336 SER3YER081W 1410 nt5.99□□□□□ -1.45
MSH3P25336 GLO2YDR272W 825 nt5.99□□□□□ -1.45
MSH3P25336 YER187WYER187W 426 nt5.99□□□□□ -1.45
MSH3P25336 MMM1YLL006W 1281 nt5.99□□□□□ -1.45
MSH3P25336 YLR456WYLR456W 615 nt5.99□□□□□ -1.45
MSH3P25336 PPG1YNR032W 1107 nt5.99□□□□□ -1.45
MSH3P25336 CKA2YOR061W 1020 nt5.99□□□□□ -1.45
MSH3P25336 YOR114WYOR114W 885 nt5.99□□□□□ -1.45
MSH3P25336 PLP2YOR281C 861 nt5.99□□□□□ -1.45
MSH3P25336 DIM1YPL266W 957 nt5.99□□□□□ -1.45
MSH3P25336 NGL2YMR285C 1548 nt5.99□□□□□ -1.45
MSH3P25336 PUT1YLR142W 1431 nt5.99□□□□□ -1.45
MSH3P25336 HPF1YOL155C 2904 nt5.98□□□□□ -1.45
MSH3P25336 IME4YGL192W 1803 nt5.98□□□□□ -1.45
MSH3P25336 DOG2YHR043C 741 nt5.98□□□□□ -1.45
MSH3P25336 DOG1YHR044C 741 nt5.98□□□□□ -1.45
MSH3P25336 YJL218WYJL218W 591 nt5.98□□□□□ -1.45
MSH3P25336 CPR7YJR032W 1182 nt5.98□□□□□ -1.45
MSH3P25336 YKL202WYKL202W 582 nt5.98□□□□□ -1.45
MSH3P25336 RPS0BYLR048W 759 nt5.98□□□□□ -1.45
MSH3P25336 SHP1YBL058W 1272 nt5.98□□□□□ -1.45
MSH3P25336 MED7YOL135C 669 nt5.98□□□□□ -1.45
MSH3P25336 PPR1YLR014C 2715 nt5.98□□□□□ -1.45
MSH3P25336 BUD8YLR353W 1812 nt5.97□□□□□ -1.45
MSH3P25336 THI22YPR121W 1719 nt5.97□□□□□ -1.45
MSH3P25336 GRX4YER174C 735 nt5.97□□□□□ -1.45
MSH3P25336 TIP20YGL145W 2106 nt5.97□□□□□ -1.45
MSH3P25336 YIP5YGL161C 933 nt5.97□□□□□ -1.45
MSH3P25336 VAM7YGL212W 951 nt5.97□□□□□ -1.45
MSH3P25336 tN(GUU)CtN(GUU)C 74 nt5.97□□□□□ -1.45
MSH3P25336 tN(GUU)FtN(GUU)F 74 nt5.97□□□□□ -1.45
MSH3P25336 tN(GUU)GtN(GUU)G 74 nt5.97□□□□□ -1.45
MSH3P25336 tN(GUU)KtN(GUU)K 74 nt5.97□□□□□ -1.45
MSH3P25336 tN(GUU)LtN(GUU)L 74 nt5.97□□□□□ -1.45
MSH3P25336 tN(GUU)N1tN(GUU)N1 74 nt5.97□□□□□ -1.45
MSH3P25336 tN(GUU)N2tN(GUU)N2 74 nt5.97□□□□□ -1.45
MSH3P25336 tN(GUU)O1tN(GUU)O1 74 nt5.97□□□□□ -1.45
MSH3P25336 tN(GUU)O2tN(GUU)O2 74 nt5.97□□□□□ -1.45
MSH3P25336 tN(GUU)PtN(GUU)P 74 nt5.97□□□□□ -1.45
MSH3P25336 LST8YNL006W 912 nt5.97□□□□□ -1.45
MSH3P25336 YNL050CYNL050C 813 nt5.97□□□□□ -1.45
MSH3P25336 ENV9YOR246C 993 nt5.97□□□□□ -1.45
MSH3P25336 PNT1YOR266W 1272 nt5.97□□□□□ -1.45
MSH3P25336 UBC4YBR082C 447 nt5.97□□□□□ -1.45
MSH3P25336 MUD1YBR119W 897 nt5.97□□□□□ -1.45
MSH3P25336 YIL067CYIL067C 2037 nt5.97□□□□□ -1.45
MSH3P25336 NOC4YPR144C 1659 nt5.97□□□□□ -1.45
MSH3P25336 ATG1YGL180W 2694 nt5.97□□□□□ -1.45
MSH3P25336 YJR061WYJR061W 2808 nt5.97□□□□□ -1.45
MSH3P25336 RPT4YOR259C 1314 nt5.97□□□□□ -1.45
MSH3P25336 PSE1YMR308C 3270 nt5.96□□□□□ -1.45
MSH3P25336 DED81YHR019C 1665 nt5.96□□□□□ -1.46
MSH3P25336 PRP38YGR075C 729 nt5.96□□□□□ -1.46
MSH3P25336 SDS3YIL084C 984 nt5.96□□□□□ -1.46
MSH3P25336 PRE7YBL041W 726 nt5.96□□□□□ -1.46
MSH3P25336 YOR032W-AYOR032W-A 201 nt5.96□□□□□ -1.46
MSH3P25336 RAS1YOR101W 930 nt5.96□□□□□ -1.46
MSH3P25336 IRC13YOR235W 315 nt5.96□□□□□ -1.46
MSH3P25336 ARR3YPR201W 1215 nt5.96□□□□□ -1.46
MSH3P25336 ADE6YGR061C 4077 nt5.96□□□□□ -1.46
MSH3P25336 COM2YER130C 1332 nt5.96□□□□□ -1.46
MSH3P25336 YTA6YPL074W 2265 nt5.95□□□□□ -1.46
MSH3P25336 KIN28YDL108W 921 nt5.95□□□□□ -1.46
MSH3P25336 COX26YDR119W-A 201 nt5.95□□□□□ -1.46
MSH3P25336 CWC23YGL128C 852 nt5.95□□□□□ -1.46
MSH3P25336 RTA1YGR213C 954 nt5.95□□□□□ -1.46
MSH3P25336 EGD2YHR193C 525 nt5.95□□□□□ -1.46
MSH3P25336 PIN2YOR104W 849 nt5.95□□□□□ -1.46
MSH3P25336 YPL062WYPL062W 405 nt5.95□□□□□ -1.46
MSH3P25336 ARA1YBR149W 1035 nt5.95□□□□□ -1.46
MSH3P25336 snR3snR3 194 nt5.95□□□□□ -1.46
MSH3P25336 SNT2YGL131C 4212 nt5.95□□□□□ -1.46
MSH3P25336 HRP1YOL123W 1605 nt5.95□□□□□ -1.46
MSH3P25336 ASK10YGR097W 3441 nt5.95□□□□□ -1.46
MSH3P25336 YGL185CYGL185C 1140 nt5.94□□□□□ -1.46
MSH3P25336 COS8YHL048W 1146 nt5.94□□□□□ -1.46
MSH3P25336 RIF2YLR453C 1188 nt5.94□□□□□ -1.46
MSH3P25336 DUG3YNL191W 1074 nt5.94□□□□□ -1.46
MSH3P25336 YBR255C-AYBR255C-A 363 nt5.94□□□□□ -1.46
MSH3P25336 IFM1YOL023W 2031 nt5.94□□□□□ -1.46
MSH3P25336 CTF13YMR094W 1437 nt5.93□□□□□ -1.46
MSH3P25336 SSZ1YHR064C 1617 nt5.93□□□□□ -1.46
MSH3P25336 MET7YOR241W 1647 nt5.93□□□□□ -1.46
MSH3P25336 SCM3YDL139C 672 nt5.93□□□□□ -1.46
MSH3P25336 GCS1YDL226C 1059 nt5.93□□□□□ -1.46
MSH3P25336 YFR034W-AYFR034W-A 288 nt5.93□□□□□ -1.46
MSH3P25336 YGR149WYGR149W 1299 nt5.93□□□□□ -1.46
MSH3P25336 AIM19YIL087C 474 nt5.93□□□□□ -1.46
MSH3P25336 VPS25YJR102C 609 nt5.93□□□□□ -1.46
MSH3P25336 MRPL16YBL038W 699 nt5.93□□□□□ -1.46
MSH3P25336 BUD17YNR027W 954 nt5.93□□□□□ -1.46
Retrieved 100 of 7,029 protein–RNA pairs in 14.8 ms