Protein–RNA interactions for Protein: Q53R12

TM4SF20, Transmembrane 4 L6 family member 20, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF20Q53R12 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
TM4SF20Q53R12 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
TM4SF20Q53R12 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TM4SF20Q53R12 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TM4SF20Q53R12 CD72-202ENST00000378430 585 ntTSL 3 BASIC17.35■□□□□ 0.37
TM4SF20Q53R12 KRT16P3-201ENST00000439127 1283 ntBASIC17.35■□□□□ 0.37
TM4SF20Q53R12 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC17.35■□□□□ 0.37
TM4SF20Q53R12 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC17.35■□□□□ 0.37
TM4SF20Q53R12 EXOG-217ENST00000630638 197 ntTSL 5 BASIC17.35■□□□□ 0.37
TM4SF20Q53R12 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TM4SF20Q53R12 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
TM4SF20Q53R12 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
TM4SF20Q53R12 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
TM4SF20Q53R12 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TM4SF20Q53R12 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC17.35■□□□□ 0.37
TM4SF20Q53R12 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TM4SF20Q53R12 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TM4SF20Q53R12 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
TM4SF20Q53R12 LSM4-201ENST00000252816 986 ntTSL 2 BASIC17.34■□□□□ 0.37
TM4SF20Q53R12 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC17.34■□□□□ 0.37
TM4SF20Q53R12 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC17.34■□□□□ 0.37
TM4SF20Q53R12 USF2-207ENST00000595068 1612 ntTSL 5 BASIC17.34■□□□□ 0.37
TM4SF20Q53R12 AC005703.6-201ENST00000623265 1329 ntBASIC17.34■□□□□ 0.37
TM4SF20Q53R12 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC17.34■□□□□ 0.37
TM4SF20Q53R12 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TM4SF20Q53R12 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TM4SF20Q53R12 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TM4SF20Q53R12 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
TM4SF20Q53R12 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
TM4SF20Q53R12 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
TM4SF20Q53R12 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC17.33■□□□□ 0.37
TM4SF20Q53R12 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TM4SF20Q53R12 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC17.33■□□□□ 0.36
TM4SF20Q53R12 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
TM4SF20Q53R12 GRAMD4P7-201ENST00000578182 1232 ntBASIC17.33■□□□□ 0.36
TM4SF20Q53R12 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
TM4SF20Q53R12 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TM4SF20Q53R12 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
TM4SF20Q53R12 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC17.33■□□□□ 0.36
TM4SF20Q53R12 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TM4SF20Q53R12 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TM4SF20Q53R12 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TM4SF20Q53R12 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TM4SF20Q53R12 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
TM4SF20Q53R12 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
TM4SF20Q53R12 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC17.32■□□□□ 0.36
TM4SF20Q53R12 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
TM4SF20Q53R12 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TM4SF20Q53R12 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
TM4SF20Q53R12 AC012676.1-201ENST00000574705 1949 ntBASIC17.32■□□□□ 0.36
TM4SF20Q53R12 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TM4SF20Q53R12 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC17.32■□□□□ 0.36
TM4SF20Q53R12 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC17.32■□□□□ 0.36
TM4SF20Q53R12 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
TM4SF20Q53R12 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC17.32■□□□□ 0.36
TM4SF20Q53R12 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TM4SF20Q53R12 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC17.32■□□□□ 0.36
TM4SF20Q53R12 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
TM4SF20Q53R12 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
TM4SF20Q53R12 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TM4SF20Q53R12 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TM4SF20Q53R12 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
TM4SF20Q53R12 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
TM4SF20Q53R12 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC17.31■□□□□ 0.36
TM4SF20Q53R12 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TM4SF20Q53R12 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
TM4SF20Q53R12 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
TM4SF20Q53R12 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TM4SF20Q53R12 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TM4SF20Q53R12 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TM4SF20Q53R12 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TM4SF20Q53R12 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
TM4SF20Q53R12 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC17.31■□□□□ 0.36
TM4SF20Q53R12 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TM4SF20Q53R12 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
TM4SF20Q53R12 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
TM4SF20Q53R12 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
TM4SF20Q53R12 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC17.3■□□□□ 0.36
TM4SF20Q53R12 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TM4SF20Q53R12 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TM4SF20Q53R12 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TM4SF20Q53R12 TFPT-201ENST00000391757 774 ntTSL 5 BASIC17.3■□□□□ 0.36
TM4SF20Q53R12 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
TM4SF20Q53R12 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC17.3■□□□□ 0.36
TM4SF20Q53R12 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
TM4SF20Q53R12 MIR6724-1-201ENST00000616420 92 ntBASIC17.3■□□□□ 0.36
TM4SF20Q53R12 MIR6724-2-201ENST00000616483 92 ntBASIC17.3■□□□□ 0.36
TM4SF20Q53R12 MIR6724-4-201ENST00000617390 92 ntBASIC17.3■□□□□ 0.36
TM4SF20Q53R12 MIR6724-3-201ENST00000622482 92 ntBASIC17.3■□□□□ 0.36
TM4SF20Q53R12 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
TM4SF20Q53R12 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TM4SF20Q53R12 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TM4SF20Q53R12 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
TM4SF20Q53R12 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
TM4SF20Q53R12 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC17.3■□□□□ 0.36
TM4SF20Q53R12 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
TM4SF20Q53R12 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TM4SF20Q53R12 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
TM4SF20Q53R12 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TM4SF20Q53R12 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms