Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CDH6P55285 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
CDH6P55285 CD72-202ENST00000378430 585 ntTSL 3 BASIC23.3■■□□□ 1.32
CDH6P55285 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC23.3■■□□□ 1.32
CDH6P55285 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC23.3■■□□□ 1.32
CDH6P55285 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC23.29■■□□□ 1.32
CDH6P55285 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CDH6P55285 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CDH6P55285 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CDH6P55285 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CDH6P55285 CREM-229ENST00000474362 1030 ntTSL 2 BASIC23.29■■□□□ 1.32
CDH6P55285 EXOG-217ENST00000630638 197 ntTSL 5 BASIC23.29■■□□□ 1.32
CDH6P55285 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC23.29■■□□□ 1.32
CDH6P55285 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC23.29■■□□□ 1.32
CDH6P55285 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC23.29■■□□□ 1.32
CDH6P55285 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CDH6P55285 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC23.29■■□□□ 1.32
CDH6P55285 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CDH6P55285 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
CDH6P55285 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC23.28■■□□□ 1.32
CDH6P55285 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC23.28■■□□□ 1.32
CDH6P55285 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CDH6P55285 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CDH6P55285 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CDH6P55285 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
CDH6P55285 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC23.28■■□□□ 1.32
CDH6P55285 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC23.28■■□□□ 1.32
CDH6P55285 AL353803.4-201ENST00000565882 1934 ntBASIC23.27■■□□□ 1.32
CDH6P55285 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CDH6P55285 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CDH6P55285 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CDH6P55285 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
CDH6P55285 UNC93B8-201ENST00000511903 705 ntBASIC23.27■■□□□ 1.32
CDH6P55285 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC23.27■■□□□ 1.32
CDH6P55285 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC23.27■■□□□ 1.32
CDH6P55285 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CDH6P55285 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
CDH6P55285 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
CDH6P55285 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC23.26■■□□□ 1.31
CDH6P55285 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC23.26■■□□□ 1.31
CDH6P55285 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC23.26■■□□□ 1.31
CDH6P55285 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
CDH6P55285 LSM4-201ENST00000252816 986 ntTSL 2 BASIC23.26■■□□□ 1.31
CDH6P55285 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
CDH6P55285 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC23.26■■□□□ 1.31
CDH6P55285 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC23.26■■□□□ 1.31
CDH6P55285 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC23.26■■□□□ 1.31
CDH6P55285 AC144652.1-201ENST00000609974 1624 ntBASIC23.26■■□□□ 1.31
CDH6P55285 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CDH6P55285 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC23.25■■□□□ 1.31
CDH6P55285 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC23.25■■□□□ 1.31
CDH6P55285 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CDH6P55285 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
CDH6P55285 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CDH6P55285 TFPT-201ENST00000391757 774 ntTSL 5 BASIC23.25■■□□□ 1.31
CDH6P55285 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
CDH6P55285 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC23.25■■□□□ 1.31
CDH6P55285 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
CDH6P55285 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC23.25■■□□□ 1.31
CDH6P55285 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CDH6P55285 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC23.24■■□□□ 1.31
CDH6P55285 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
CDH6P55285 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC23.24■■□□□ 1.31
CDH6P55285 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC23.24■■□□□ 1.31
CDH6P55285 GUSBP5-201ENST00000418136 578 ntBASIC23.24■■□□□ 1.31
CDH6P55285 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC23.24■■□□□ 1.31
CDH6P55285 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC23.24■■□□□ 1.31
CDH6P55285 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CDH6P55285 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CDH6P55285 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC23.24■■□□□ 1.31
CDH6P55285 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC23.24■■□□□ 1.31
CDH6P55285 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC23.24■■□□□ 1.31
CDH6P55285 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC23.23■■□□□ 1.31
CDH6P55285 GALC-202ENST00000393568 2054 ntTSL 2 BASIC23.23■■□□□ 1.31
CDH6P55285 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC23.23■■□□□ 1.31
CDH6P55285 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
CDH6P55285 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
CDH6P55285 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC23.23■■□□□ 1.31
CDH6P55285 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
CDH6P55285 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC23.22■■□□□ 1.31
CDH6P55285 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC23.22■■□□□ 1.31
CDH6P55285 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CDH6P55285 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
CDH6P55285 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC23.22■■□□□ 1.31
CDH6P55285 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
CDH6P55285 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC23.22■■□□□ 1.31
CDH6P55285 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
CDH6P55285 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC23.22■■□□□ 1.31
CDH6P55285 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC23.22■■□□□ 1.31
CDH6P55285 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC23.21■■□□□ 1.31
CDH6P55285 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC23.21■■□□□ 1.31
CDH6P55285 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC23.21■■□□□ 1.31
CDH6P55285 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC23.21■■□□□ 1.31
CDH6P55285 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC23.21■■□□□ 1.31
CDH6P55285 C1orf229-201ENST00000623686 2258 ntBASIC23.21■■□□□ 1.31
CDH6P55285 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC23.21■■□□□ 1.31
CDH6P55285 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC23.2■■□□□ 1.3
CDH6P55285 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC23.2■■□□□ 1.3
CDH6P55285 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
CDH6P55285 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC23.2■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 108.1 ms