Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CSNK1A1P48729 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC19.9■□□□□ 0.78
CSNK1A1P48729 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CSNK1A1P48729 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC19.9■□□□□ 0.78
CSNK1A1P48729 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC19.9■□□□□ 0.78
CSNK1A1P48729 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CSNK1A1P48729 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CSNK1A1P48729 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CSNK1A1P48729 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CSNK1A1P48729 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC19.9■□□□□ 0.78
CSNK1A1P48729 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CSNK1A1P48729 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC19.9■□□□□ 0.78
CSNK1A1P48729 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC19.9■□□□□ 0.78
CSNK1A1P48729 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CSNK1A1P48729 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CSNK1A1P48729 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CSNK1A1P48729 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CSNK1A1P48729 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CSNK1A1P48729 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CSNK1A1P48729 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
CSNK1A1P48729 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC19.89■□□□□ 0.77
CSNK1A1P48729 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
CSNK1A1P48729 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CSNK1A1P48729 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CSNK1A1P48729 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
CSNK1A1P48729 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
CSNK1A1P48729 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CSNK1A1P48729 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC19.88■□□□□ 0.77
CSNK1A1P48729 AL356441.2-201ENST00000443009 864 ntBASIC19.88■□□□□ 0.77
CSNK1A1P48729 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC19.88■□□□□ 0.77
CSNK1A1P48729 DUSP8P3-201ENST00000399571 1760 ntBASIC19.88■□□□□ 0.77
CSNK1A1P48729 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CSNK1A1P48729 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC19.87■□□□□ 0.77
CSNK1A1P48729 AC009102.2-201ENST00000606772 1639 ntBASIC19.87■□□□□ 0.77
CSNK1A1P48729 AC144652.1-201ENST00000609974 1624 ntBASIC19.87■□□□□ 0.77
CSNK1A1P48729 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CSNK1A1P48729 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC19.87■□□□□ 0.77
CSNK1A1P48729 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CSNK1A1P48729 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CSNK1A1P48729 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC19.87■□□□□ 0.77
CSNK1A1P48729 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC19.87■□□□□ 0.77
CSNK1A1P48729 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CSNK1A1P48729 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CSNK1A1P48729 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CSNK1A1P48729 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CSNK1A1P48729 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CSNK1A1P48729 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
CSNK1A1P48729 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC19.86■□□□□ 0.77
CSNK1A1P48729 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CSNK1A1P48729 AL356740.2-201ENST00000601559 647 ntBASIC19.86■□□□□ 0.77
CSNK1A1P48729 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC19.86■□□□□ 0.77
CSNK1A1P48729 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CSNK1A1P48729 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CSNK1A1P48729 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
CSNK1A1P48729 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC19.86■□□□□ 0.77
CSNK1A1P48729 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC19.86■□□□□ 0.77
CSNK1A1P48729 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CSNK1A1P48729 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
CSNK1A1P48729 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC19.86■□□□□ 0.77
CSNK1A1P48729 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CSNK1A1P48729 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CSNK1A1P48729 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC19.85■□□□□ 0.77
CSNK1A1P48729 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CSNK1A1P48729 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CSNK1A1P48729 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC19.85■□□□□ 0.77
CSNK1A1P48729 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC19.85■□□□□ 0.77
CSNK1A1P48729 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC19.85■□□□□ 0.77
CSNK1A1P48729 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC19.85■□□□□ 0.77
CSNK1A1P48729 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CSNK1A1P48729 AL117332.1-201ENST00000622628 974 ntBASIC19.85■□□□□ 0.77
CSNK1A1P48729 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CSNK1A1P48729 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CSNK1A1P48729 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC19.85■□□□□ 0.77
CSNK1A1P48729 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CSNK1A1P48729 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
CSNK1A1P48729 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC19.85■□□□□ 0.77
CSNK1A1P48729 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CSNK1A1P48729 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CSNK1A1P48729 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CSNK1A1P48729 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
CSNK1A1P48729 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CSNK1A1P48729 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CSNK1A1P48729 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
CSNK1A1P48729 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CSNK1A1P48729 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
CSNK1A1P48729 AL353803.4-201ENST00000565882 1934 ntBASIC19.83■□□□□ 0.77
CSNK1A1P48729 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC19.83■□□□□ 0.77
CSNK1A1P48729 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC19.83■□□□□ 0.77
CSNK1A1P48729 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
CSNK1A1P48729 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC19.83■□□□□ 0.76
CSNK1A1P48729 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
CSNK1A1P48729 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CSNK1A1P48729 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
CSNK1A1P48729 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CSNK1A1P48729 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC19.82■□□□□ 0.76
CSNK1A1P48729 NKILA-201ENST00000613231 537 ntTSL 4 BASIC19.82■□□□□ 0.76
CSNK1A1P48729 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
CSNK1A1P48729 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CSNK1A1P48729 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CSNK1A1P48729 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 68.3 ms