Protein–RNA interactions for Protein: P13500

CCL2, C-C motif chemokine 2, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL2P13500 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
CCL2P13500 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCL2P13500 AL512631.2-201ENST00000604634 923 ntBASIC19.51■□□□□ 0.71
CCL2P13500 MIR4466-201ENST00000606121 54 ntBASIC19.51■□□□□ 0.71
CCL2P13500 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC19.51■□□□□ 0.71
CCL2P13500 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CCL2P13500 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCL2P13500 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCL2P13500 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCL2P13500 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC19.51■□□□□ 0.71
CCL2P13500 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCL2P13500 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCL2P13500 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCL2P13500 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCL2P13500 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCL2P13500 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
CCL2P13500 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC19.5■□□□□ 0.71
CCL2P13500 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCL2P13500 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CCL2P13500 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC19.5■□□□□ 0.71
CCL2P13500 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC19.5■□□□□ 0.71
CCL2P13500 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CCL2P13500 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCL2P13500 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCL2P13500 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
CCL2P13500 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCL2P13500 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCL2P13500 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCL2P13500 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC19.49■□□□□ 0.71
CCL2P13500 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCL2P13500 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCL2P13500 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC19.49■□□□□ 0.71
CCL2P13500 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
CCL2P13500 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCL2P13500 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCL2P13500 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCL2P13500 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC19.49■□□□□ 0.71
CCL2P13500 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC19.48■□□□□ 0.71
CCL2P13500 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCL2P13500 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCL2P13500 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC19.48■□□□□ 0.71
CCL2P13500 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
CCL2P13500 ASB1-202ENST00000409297 878 ntTSL 5 BASIC19.48■□□□□ 0.71
CCL2P13500 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC19.48■□□□□ 0.71
CCL2P13500 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
CCL2P13500 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC19.48■□□□□ 0.71
CCL2P13500 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCL2P13500 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC19.48■□□□□ 0.71
CCL2P13500 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC19.48■□□□□ 0.71
CCL2P13500 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCL2P13500 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCL2P13500 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCL2P13500 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCL2P13500 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC19.47■□□□□ 0.71
CCL2P13500 C17orf82-201ENST00000623772 1530 ntBASIC19.47■□□□□ 0.71
CCL2P13500 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC19.47■□□□□ 0.71
CCL2P13500 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCL2P13500 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCL2P13500 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC19.47■□□□□ 0.71
CCL2P13500 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCL2P13500 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
CCL2P13500 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC19.47■□□□□ 0.71
CCL2P13500 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC19.47■□□□□ 0.71
CCL2P13500 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC19.47■□□□□ 0.71
CCL2P13500 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CCL2P13500 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCL2P13500 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC19.46■□□□□ 0.71
CCL2P13500 AC008406.3-201ENST00000620001 1374 ntBASIC19.46■□□□□ 0.71
CCL2P13500 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
CCL2P13500 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCL2P13500 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC19.46■□□□□ 0.71
CCL2P13500 C9orf163-202ENST00000624034 2573 ntBASIC19.46■□□□□ 0.71
CCL2P13500 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC19.46■□□□□ 0.71
CCL2P13500 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCL2P13500 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCL2P13500 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC19.46■□□□□ 0.71
CCL2P13500 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
CCL2P13500 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC19.45■□□□□ 0.7
CCL2P13500 AL353803.4-201ENST00000565882 1934 ntBASIC19.45■□□□□ 0.7
CCL2P13500 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCL2P13500 NFE2L3P1-201ENST00000588207 1959 ntBASIC19.45■□□□□ 0.7
CCL2P13500 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCL2P13500 AC144652.1-201ENST00000609974 1624 ntBASIC19.45■□□□□ 0.7
CCL2P13500 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CCL2P13500 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCL2P13500 AL136116.3-201ENST00000402907 1138 ntBASIC19.45■□□□□ 0.7
CCL2P13500 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC19.45■□□□□ 0.7
CCL2P13500 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCL2P13500 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CCL2P13500 AC092068.2-201ENST00000590491 1708 ntBASIC19.45■□□□□ 0.7
CCL2P13500 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC19.45■□□□□ 0.7
CCL2P13500 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCL2P13500 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CCL2P13500 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCL2P13500 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCL2P13500 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCL2P13500 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CCL2P13500 SRD5A1P1-201ENST00000442297 786 ntBASIC19.44■□□□□ 0.7
CCL2P13500 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
CCL2P13500 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms