Protein–RNA interactions for Protein: P04155

TFF1, Trefoil factor 1, humanhuman

Predictions only

Length 84 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TFF1P04155 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
TFF1P04155 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
TFF1P04155 TRIR-202ENST00000588213 841 ntTSL 3 BASIC18.83■□□□□ 0.6
TFF1P04155 NKILA-201ENST00000613231 537 ntTSL 4 BASIC18.83■□□□□ 0.6
TFF1P04155 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TFF1P04155 AC133561.1-201ENST00000568600 2415 ntBASIC18.83■□□□□ 0.6
TFF1P04155 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
TFF1P04155 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TFF1P04155 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC18.82■□□□□ 0.6
TFF1P04155 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TFF1P04155 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
TFF1P04155 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TFF1P04155 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
TFF1P04155 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC18.82■□□□□ 0.6
TFF1P04155 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TFF1P04155 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TFF1P04155 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TFF1P04155 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
TFF1P04155 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TFF1P04155 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
TFF1P04155 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC18.82■□□□□ 0.6
TFF1P04155 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TFF1P04155 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TFF1P04155 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC18.82■□□□□ 0.6
TFF1P04155 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TFF1P04155 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TFF1P04155 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC18.81■□□□□ 0.6
TFF1P04155 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TFF1P04155 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
TFF1P04155 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
TFF1P04155 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TFF1P04155 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TFF1P04155 AC092068.2-201ENST00000590491 1708 ntBASIC18.81■□□□□ 0.6
TFF1P04155 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC18.81■□□□□ 0.6
TFF1P04155 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
TFF1P04155 ASB1-202ENST00000409297 878 ntTSL 5 BASIC18.81■□□□□ 0.6
TFF1P04155 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC18.81■□□□□ 0.6
TFF1P04155 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC18.81■□□□□ 0.6
TFF1P04155 AC131212.1-201ENST00000613771 668 ntBASIC18.81■□□□□ 0.6
TFF1P04155 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TFF1P04155 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC18.81■□□□□ 0.6
TFF1P04155 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
TFF1P04155 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TFF1P04155 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC18.81■□□□□ 0.6
TFF1P04155 RARA-203ENST00000394086 2008 ntTSL 2 BASIC18.81■□□□□ 0.6
TFF1P04155 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TFF1P04155 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC18.8■□□□□ 0.6
TFF1P04155 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC18.8■□□□□ 0.6
TFF1P04155 QDPR-206ENST00000508623 601 ntTSL 3 BASIC18.8■□□□□ 0.6
TFF1P04155 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC18.8■□□□□ 0.6
TFF1P04155 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
TFF1P04155 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
TFF1P04155 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TFF1P04155 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC18.8■□□□□ 0.6
TFF1P04155 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TFF1P04155 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC18.8■□□□□ 0.6
TFF1P04155 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
TFF1P04155 SRR-208ENST00000576848 588 ntTSL 4 BASIC18.79■□□□□ 0.6
TFF1P04155 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC18.79■□□□□ 0.6
TFF1P04155 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC18.79■□□□□ 0.6
TFF1P04155 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
TFF1P04155 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC18.79■□□□□ 0.6
TFF1P04155 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC18.79■□□□□ 0.6
TFF1P04155 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
TFF1P04155 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
TFF1P04155 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TFF1P04155 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
TFF1P04155 AL353803.4-201ENST00000565882 1934 ntBASIC18.78■□□□□ 0.6
TFF1P04155 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
TFF1P04155 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC18.78■□□□□ 0.6
TFF1P04155 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TFF1P04155 MIR3621-201ENST00000580529 85 ntBASIC18.78■□□□□ 0.6
TFF1P04155 AL356740.2-201ENST00000601559 647 ntBASIC18.78■□□□□ 0.6
TFF1P04155 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC18.78■□□□□ 0.6
TFF1P04155 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC18.78■□□□□ 0.6
TFF1P04155 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TFF1P04155 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC18.78■□□□□ 0.6
TFF1P04155 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TFF1P04155 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC18.78■□□□□ 0.6
TFF1P04155 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TFF1P04155 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TFF1P04155 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC18.77■□□□□ 0.6
TFF1P04155 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TFF1P04155 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC18.77■□□□□ 0.6
TFF1P04155 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC18.77■□□□□ 0.6
TFF1P04155 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TFF1P04155 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC18.77■□□□□ 0.59
TFF1P04155 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC18.77■□□□□ 0.59
TFF1P04155 LTK-203ENST00000453182 2412 ntTSL 2 BASIC18.76■□□□□ 0.59
TFF1P04155 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC18.76■□□□□ 0.59
TFF1P04155 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC18.76■□□□□ 0.59
TFF1P04155 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC18.76■□□□□ 0.59
TFF1P04155 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC18.76■□□□□ 0.59
TFF1P04155 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TFF1P04155 DUSP8P3-201ENST00000399571 1760 ntBASIC18.76■□□□□ 0.59
TFF1P04155 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC18.76■□□□□ 0.59
TFF1P04155 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC18.76■□□□□ 0.59
TFF1P04155 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC18.76■□□□□ 0.59
TFF1P04155 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC18.76■□□□□ 0.59
TFF1P04155 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms