Protein–RNA interactions for Protein: O75365

PTP4A3, Protein tyrosine phosphatase type IVA 3, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3O75365 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PTP4A3O75365 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PTP4A3O75365 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC20.21■□□□□ 0.83
PTP4A3O75365 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PTP4A3O75365 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
PTP4A3O75365 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PTP4A3O75365 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC20.21■□□□□ 0.83
PTP4A3O75365 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC20.21■□□□□ 0.83
PTP4A3O75365 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PTP4A3O75365 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC20.21■□□□□ 0.83
PTP4A3O75365 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC20.21■□□□□ 0.83
PTP4A3O75365 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PTP4A3O75365 ECEL1P1-201ENST00000373592 1742 ntBASIC20.21■□□□□ 0.83
PTP4A3O75365 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PTP4A3O75365 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PTP4A3O75365 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PTP4A3O75365 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC20.2■□□□□ 0.82
PTP4A3O75365 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC20.2■□□□□ 0.82
PTP4A3O75365 LINC00526-201ENST00000581067 1875 ntBASIC20.2■□□□□ 0.82
PTP4A3O75365 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC20.2■□□□□ 0.82
PTP4A3O75365 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
PTP4A3O75365 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
PTP4A3O75365 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PTP4A3O75365 YBX1P4-201ENST00000392794 808 ntBASIC20.2■□□□□ 0.82
PTP4A3O75365 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC20.2■□□□□ 0.82
PTP4A3O75365 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PTP4A3O75365 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PTP4A3O75365 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PTP4A3O75365 KRT8P33-201ENST00000508125 1423 ntBASIC20.19■□□□□ 0.82
PTP4A3O75365 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
PTP4A3O75365 SENP5-202ENST00000419026 973 ntTSL 3 BASIC20.19■□□□□ 0.82
PTP4A3O75365 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC20.19■□□□□ 0.82
PTP4A3O75365 TK2-216ENST00000564917 1156 ntTSL 3 BASIC20.19■□□□□ 0.82
PTP4A3O75365 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PTP4A3O75365 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
PTP4A3O75365 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PTP4A3O75365 LSR-203ENST00000360798 1963 ntTSL 2 BASIC20.19■□□□□ 0.82
PTP4A3O75365 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PTP4A3O75365 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PTP4A3O75365 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
PTP4A3O75365 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC20.18■□□□□ 0.82
PTP4A3O75365 STK25-234ENST00000535007 2459 ntTSL 2 BASIC20.18■□□□□ 0.82
PTP4A3O75365 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PTP4A3O75365 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PTP4A3O75365 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC20.18■□□□□ 0.82
PTP4A3O75365 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
PTP4A3O75365 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
PTP4A3O75365 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.17■□□□□ 0.82
PTP4A3O75365 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC20.17■□□□□ 0.82
PTP4A3O75365 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
PTP4A3O75365 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PTP4A3O75365 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PTP4A3O75365 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC20.17■□□□□ 0.82
PTP4A3O75365 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
PTP4A3O75365 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC20.17■□□□□ 0.82
PTP4A3O75365 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
PTP4A3O75365 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC20.17■□□□□ 0.82
PTP4A3O75365 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC20.17■□□□□ 0.82
PTP4A3O75365 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PTP4A3O75365 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PTP4A3O75365 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
PTP4A3O75365 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
PTP4A3O75365 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PTP4A3O75365 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
PTP4A3O75365 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC20.16■□□□□ 0.82
PTP4A3O75365 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC20.16■□□□□ 0.82
PTP4A3O75365 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC20.16■□□□□ 0.82
PTP4A3O75365 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC20.16■□□□□ 0.82
PTP4A3O75365 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC20.16■□□□□ 0.82
PTP4A3O75365 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PTP4A3O75365 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
PTP4A3O75365 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC20.16■□□□□ 0.82
PTP4A3O75365 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC20.16■□□□□ 0.82
PTP4A3O75365 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
PTP4A3O75365 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
PTP4A3O75365 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PTP4A3O75365 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
PTP4A3O75365 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC20.15■□□□□ 0.82
PTP4A3O75365 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
PTP4A3O75365 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
PTP4A3O75365 AC144652.1-201ENST00000609974 1624 ntBASIC20.15■□□□□ 0.82
PTP4A3O75365 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
PTP4A3O75365 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
PTP4A3O75365 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
PTP4A3O75365 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
PTP4A3O75365 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC20.15■□□□□ 0.82
PTP4A3O75365 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
PTP4A3O75365 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC20.14■□□□□ 0.81
PTP4A3O75365 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC20.14■□□□□ 0.81
PTP4A3O75365 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
PTP4A3O75365 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PTP4A3O75365 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC20.14■□□□□ 0.81
PTP4A3O75365 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
PTP4A3O75365 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PTP4A3O75365 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
PTP4A3O75365 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC20.14■□□□□ 0.81
PTP4A3O75365 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC20.14■□□□□ 0.81
PTP4A3O75365 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC20.14■□□□□ 0.81
PTP4A3O75365 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
PTP4A3O75365 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms