Protein–RNA interactions for Protein: Q04487

SHH3, Mitochondrial inner membrane protein SHH3, yeastyeast

Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SHH3Q04487 SNG1YGR197C 1644 nt8.88□□□□□ -0.99
SHH3Q04487 RAX1YOR301W 1308 nt8.88□□□□□ -0.99
SHH3Q04487 PBP1YGR178C 2169 nt8.86□□□□□ -0.99
SHH3Q04487 DIC1YLR348C 897 nt8.86□□□□□ -0.99
SHH3Q04487 GAL1YBR020W 1587 nt8.86□□□□□ -0.99
SHH3Q04487 HEL2YDR266C 1920 nt8.86□□□□□ -0.99
SHH3Q04487 AAC1YMR056C 930 nt8.85□□□□□ -0.99
SHH3Q04487 TRM5YHR070W 1500 nt8.84□□□□□ -0.99
SHH3Q04487 FUR4YBR021W 1902 nt8.84□□□□□ -1
SHH3Q04487 CCA1YER168C 1641 nt8.83□□□□□ -1
SHH3Q04487 DDR2YOL052C-A 186 nt8.83□□□□□ -1
SHH3Q04487 CYT2YKL087C 675 nt8.82□□□□□ -1
SHH3Q04487 BIO5YNR056C 1686 nt8.81□□□□□ -1
SHH3Q04487 YDL086C-AYDL086C-A 435 nt8.8□□□□□ -1
SHH3Q04487 AQY1YPR192W 918 nt8.79□□□□□ -1
SHH3Q04487 RPM1RPM1 483 nt8.78□□□□□ -1
SHH3Q04487 ANP1YEL036C 1503 nt8.78□□□□□ -1
SHH3Q04487 PRP4YPR178W 1398 nt8.77□□□□□ -1.01
SHH3Q04487 DPS1YLL018C 1674 nt8.74□□□□□ -1.01
SHH3Q04487 BNA2YJR078W 1362 nt8.73□□□□□ -1.01
SHH3Q04487 YEL076C-AYEL076C-A 651 nt8.72□□□□□ -1.01
SHH3Q04487 YEL076CYEL076C 651 nt8.72□□□□□ -1.01
SHH3Q04487 YLR464WYLR464W 651 nt8.72□□□□□ -1.01
SHH3Q04487 MIC12YBR262C 321 nt8.72□□□□□ -1.01
SHH3Q04487 SPC25YER018C 666 nt8.71□□□□□ -1.02
SHH3Q04487 YLR235CYLR235C 399 nt8.71□□□□□ -1.02
SHH3Q04487 STB1YNL309W 1263 nt8.71□□□□□ -1.02
SHH3Q04487 YDR524C-BYDR524C-B 201 nt8.7□□□□□ -1.02
SHH3Q04487 Q0182Q0182 405 nt8.69□□□□□ -1.02
SHH3Q04487 PTH1YHR189W 573 nt8.69□□□□□ -1.02
SHH3Q04487 TIM23YNR017W 669 nt8.69□□□□□ -1.02
SHH3Q04487 FEN2YCR028C 1539 nt8.68□□□□□ -1.02
SHH3Q04487 SNF1YDR477W 1902 nt8.67□□□□□ -1.02
SHH3Q04487 GPI16YHR188C 1833 nt8.67□□□□□ -1.02
SHH3Q04487 YLR179CYLR179C 606 nt8.66□□□□□ -1.02
SHH3Q04487 WSC2YNL283C 1512 nt8.65□□□□□ -1.02
SHH3Q04487 AGP1YCL025C 1902 nt8.64□□□□□ -1.03
SHH3Q04487 SPP1YPL138C 1062 nt8.63□□□□□ -1.03
SHH3Q04487 YKR005CYKR005C 1578 nt8.63□□□□□ -1.03
SHH3Q04487 BMT6YLR063W 1098 nt8.62□□□□□ -1.03
SHH3Q04487 HHO1YPL127C 777 nt8.62□□□□□ -1.03
SHH3Q04487 YCL074WYCL074W 927 nt8.61□□□□□ -1.03
SHH3Q04487 VPS60YDR486C 690 nt8.61□□□□□ -1.03
SHH3Q04487 AHT1YHR093W 549 nt8.61□□□□□ -1.03
SHH3Q04487 YIR016WYIR016W 798 nt8.61□□□□□ -1.03
SHH3Q04487 YAT1YAR035W 2064 nt8.61□□□□□ -1.03
SHH3Q04487 CCT4YDL143W 1587 nt8.61□□□□□ -1.03
SHH3Q04487 SFP1YLR403W 2052 nt8.6□□□□□ -1.03
SHH3Q04487 MET2YNL277W 1461 nt8.6□□□□□ -1.03
SHH3Q04487 DUS1YML080W 1272 nt8.59□□□□□ -1.03
SHH3Q04487 YGR201CYGR201C 678 nt8.58□□□□□ -1.04
SHH3Q04487 NDI1YML120C 1542 nt8.58□□□□□ -1.04
SHH3Q04487 YKL030WYKL030W 606 nt8.57□□□□□ -1.04
SHH3Q04487 ALG3YBL082C 1377 nt8.56□□□□□ -1.04
SHH3Q04487 YGR259CYGR259C 441 nt8.55□□□□□ -1.04
SHH3Q04487 YPR064WYPR064W 420 nt8.54□□□□□ -1.04
SHH3Q04487 SWC5YBR231C 912 nt8.54□□□□□ -1.04
SHH3Q04487 XDJ1YLR090W 1380 nt8.53□□□□□ -1.04
SHH3Q04487 MOT3YMR070W 1473 nt8.52□□□□□ -1.05
SHH3Q04487 IRC24YIR036C 792 nt8.51□□□□□ -1.05
SHH3Q04487 RIM8YGL045W 1629 nt8.51□□□□□ -1.05
SHH3Q04487 NPP1YCR026C 2229 nt8.5□□□□□ -1.05
SHH3Q04487 MAE1YKL029C 2010 nt8.49□□□□□ -1.05
SHH3Q04487 TAD3YLR316C 969 nt8.48□□□□□ -1.05
SHH3Q04487 RDN18-1RDN18-1 1800 nt8.47□□□□□ -1.05
SHH3Q04487 RDN18-2RDN18-2 1800 nt8.47□□□□□ -1.05
SHH3Q04487 STR3YGL184C 1398 nt8.47□□□□□ -1.05
SHH3Q04487 SPT20YOL148C 1815 nt8.45□□□□□ -1.06
SHH3Q04487 DUT1YBR252W 444 nt8.44□□□□□ -1.06
SHH3Q04487 GOR1YNL274C 1053 nt8.42□□□□□ -1.06
SHH3Q04487 YGL114WYGL114W 2178 nt8.42□□□□□ -1.06
SHH3Q04487 GDH3YAL062W 1374 nt8.41□□□□□ -1.06
SHH3Q04487 AVT6YER119C 1347 nt8.41□□□□□ -1.06
SHH3Q04487 HMG2YLR450W 3138 nt8.39□□□□□ -1.07
SHH3Q04487 BDH1YAL060W 1149 nt8.39□□□□□ -1.07
SHH3Q04487 AQY2YLL052C 450 nt8.38□□□□□ -1.07
SHH3Q04487 RTN2YDL204W 1182 nt8.37□□□□□ -1.07
SHH3Q04487 TPO4YOR273C 1980 nt8.36□□□□□ -1.07
SHH3Q04487 YLR415CYLR415C 339 nt8.36□□□□□ -1.07
SHH3Q04487 RTG1YOL067C 534 nt8.35□□□□□ -1.07
SHH3Q04487 SHM2YLR058C 1410 nt8.34□□□□□ -1.07
SHH3Q04487 GID7YCL039W 2238 nt8.34□□□□□ -1.07
SHH3Q04487 tL(GAG)GtL(GAG)G 82 nt8.32□□□□□ -1.08
SHH3Q04487 UGA4YDL210W 1716 nt8.32□□□□□ -1.08
SHH3Q04487 TIM17YJL143W 477 nt8.3□□□□□ -1.08
SHH3Q04487 ACO2YJL200C 2370 nt8.3□□□□□ -1.08
SHH3Q04487 DAT1YML113W 747 nt8.29□□□□□ -1.08
SHH3Q04487 RPC82YPR190C 1965 nt8.29□□□□□ -1.08
SHH3Q04487 YSP3YOR003W 1437 nt8.28□□□□□ -1.08
SHH3Q04487 MUP1YGR055W 1725 nt8.27□□□□□ -1.09
SHH3Q04487 SSN3YPL042C 1668 nt8.26□□□□□ -1.09
SHH3Q04487 NIT1YIL164C 600 nt8.25□□□□□ -1.09
SHH3Q04487 NBP35YGL091C 987 nt8.23□□□□□ -1.09
SHH3Q04487 YCR102CYCR102C 1107 nt8.22□□□□□ -1.09
SHH3Q04487 URA8YJR103W 1737 nt8.22□□□□□ -1.09
SHH3Q04487 ARP6YLR085C 1317 nt8.22□□□□□ -1.09
SHH3Q04487 HUA1YGR268C 597 nt8.21□□□□□ -1.1
SHH3Q04487 INA1YLR413W 2028 nt8.2□□□□□ -1.1
SHH3Q04487 PLB1YMR008C 1995 nt8.2□□□□□ -1.1
SHH3Q04487 SGT2YOR007C 1041 nt8.19□□□□□ -1.1
Retrieved 100 of 7,029 protein–RNA pairs in 13.4 ms