Protein–RNA interactions for Protein: Q04338

VTI1, t-SNARE VTI1, yeastyeast

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VTI1Q04338 YDL086C-AYDL086C-A 435 nt11.49□□□□□ -0.57
VTI1Q04338 GLK1YCL040W 1503 nt11.47□□□□□ -0.57
VTI1Q04338 FUR4YBR021W 1902 nt11.46□□□□□ -0.58
VTI1Q04338 ANP1YEL036C 1503 nt11.44□□□□□ -0.58
VTI1Q04338 YLR235CYLR235C 399 nt11.42□□□□□ -0.58
VTI1Q04338 TIM23YNR017W 669 nt11.42□□□□□ -0.58
VTI1Q04338 AQY1YPR192W 918 nt11.42□□□□□ -0.58
VTI1Q04338 YDR524C-BYDR524C-B 201 nt11.4□□□□□ -0.58
VTI1Q04338 YLR179CYLR179C 606 nt11.4□□□□□ -0.58
VTI1Q04338 BNA2YJR078W 1362 nt11.4□□□□□ -0.59
VTI1Q04338 STB1YNL309W 1263 nt11.39□□□□□ -0.59
VTI1Q04338 YJL225CYJL225C 5277 nt11.37□□□□□ -0.59
VTI1Q04338 FEN2YCR028C 1539 nt11.36□□□□□ -0.59
VTI1Q04338 SPC25YER018C 666 nt11.36□□□□□ -0.59
VTI1Q04338 MIC12YBR262C 321 nt11.32□□□□□ -0.6
VTI1Q04338 GPI16YHR188C 1833 nt11.32□□□□□ -0.6
VTI1Q04338 AGP1YCL025C 1902 nt11.29□□□□□ -0.6
VTI1Q04338 VPS60YDR486C 690 nt11.29□□□□□ -0.6
VTI1Q04338 PRP4YPR178W 1398 nt11.28□□□□□ -0.6
VTI1Q04338 WSC2YNL283C 1512 nt11.28□□□□□ -0.6
VTI1Q04338 YIR016WYIR016W 798 nt11.27□□□□□ -0.61
VTI1Q04338 YKL030WYKL030W 606 nt11.27□□□□□ -0.61
VTI1Q04338 HHO1YPL127C 777 nt11.27□□□□□ -0.61
VTI1Q04338 CCT4YDL143W 1587 nt11.26□□□□□ -0.61
VTI1Q04338 YEL076C-AYEL076C-A 651 nt11.26□□□□□ -0.61
VTI1Q04338 YEL076CYEL076C 651 nt11.26□□□□□ -0.61
VTI1Q04338 AHT1YHR093W 549 nt11.26□□□□□ -0.61
VTI1Q04338 YLR464WYLR464W 651 nt11.26□□□□□ -0.61
VTI1Q04338 ALG12YNR030W 1656 nt11.25□□□□□ -0.61
VTI1Q04338 DUS1YML080W 1272 nt11.25□□□□□ -0.61
VTI1Q04338 ALG3YBL082C 1377 nt11.24□□□□□ -0.61
VTI1Q04338 DPS1YLL018C 1674 nt11.22□□□□□ -0.61
VTI1Q04338 SWC5YBR231C 912 nt11.21□□□□□ -0.61
VTI1Q04338 YPR064WYPR064W 420 nt11.2□□□□□ -0.62
VTI1Q04338 UME6YDR207C 2511 nt11.2□□□□□ -0.62
VTI1Q04338 YKR005CYKR005C 1578 nt11.17□□□□□ -0.62
VTI1Q04338 YCL074WYCL074W 927 nt11.17□□□□□ -0.62
VTI1Q04338 AAC1YMR056C 930 nt11.17□□□□□ -0.62
VTI1Q04338 BMT6YLR063W 1098 nt11.14□□□□□ -0.63
VTI1Q04338 YGR201CYGR201C 678 nt11.12□□□□□ -0.63
VTI1Q04338 TAD3YLR316C 969 nt11.12□□□□□ -0.63
VTI1Q04338 XDJ1YLR090W 1380 nt11.12□□□□□ -0.63
VTI1Q04338 DUT1YBR252W 444 nt11.11□□□□□ -0.63
VTI1Q04338 MCH5YOR306C 1566 nt11.09□□□□□ -0.63
VTI1Q04338 YGR259CYGR259C 441 nt11.08□□□□□ -0.64
VTI1Q04338 RDN18-1RDN18-1 1800 nt11.06□□□□□ -0.64
VTI1Q04338 RDN18-2RDN18-2 1800 nt11.06□□□□□ -0.64
VTI1Q04338 SNF1YDR477W 1902 nt11.05□□□□□ -0.64
VTI1Q04338 RTG1YOL067C 534 nt11.05□□□□□ -0.64
VTI1Q04338 STR3YGL184C 1398 nt11.04□□□□□ -0.64
VTI1Q04338 AVT6YER119C 1347 nt11.04□□□□□ -0.64
VTI1Q04338 GDH3YAL062W 1374 nt11.02□□□□□ -0.65
VTI1Q04338 BIO5YNR056C 1686 nt11.01□□□□□ -0.65
VTI1Q04338 GOR1YNL274C 1053 nt11.01□□□□□ -0.65
VTI1Q04338 BDH1YAL060W 1149 nt11□□□□□ -0.65
VTI1Q04338 FRE6YLL051C 2139 nt11□□□□□ -0.65
VTI1Q04338 AQY2YLL052C 450 nt10.99□□□□□ -0.65
VTI1Q04338 NAR1YNL240C 1476 nt10.98□□□□□ -0.65
VTI1Q04338 IRC24YIR036C 792 nt10.97□□□□□ -0.65
VTI1Q04338 YLR415CYLR415C 339 nt10.97□□□□□ -0.65
VTI1Q04338 SHM2YLR058C 1410 nt10.93□□□□□ -0.66
VTI1Q04338 tL(GAG)GtL(GAG)G 82 nt10.93□□□□□ -0.66
VTI1Q04338 TIM17YJL143W 477 nt10.87□□□□□ -0.67
VTI1Q04338 YSP3YOR003W 1437 nt10.86□□□□□ -0.67
VTI1Q04338 HUA1YGR268C 597 nt10.85□□□□□ -0.67
VTI1Q04338 PBP1YGR178C 2169 nt10.84□□□□□ -0.67
VTI1Q04338 RTN2YDL204W 1182 nt10.84□□□□□ -0.67
VTI1Q04338 NIT1YIL164C 600 nt10.81□□□□□ -0.68
VTI1Q04338 CYT2YKL087C 675 nt10.8□□□□□ -0.68
VTI1Q04338 DAT1YML113W 747 nt10.78□□□□□ -0.68
VTI1Q04338 SGT2YOR007C 1041 nt10.76□□□□□ -0.69
VTI1Q04338 YNL115CYNL115C 1935 nt10.76□□□□□ -0.69
VTI1Q04338 YCR102CYCR102C 1107 nt10.72□□□□□ -0.69
VTI1Q04338 NBP35YGL091C 987 nt10.72□□□□□ -0.69
VTI1Q04338 RDN37-1RDN37-1 5354 nt10.71□□□□□ -0.7
VTI1Q04338 RDN37-2RDN37-2 5354 nt10.71□□□□□ -0.7
VTI1Q04338 PLB1YMR008C 1995 nt10.7□□□□□ -0.7
VTI1Q04338 PEX25YPL112C 1185 nt10.69□□□□□ -0.7
VTI1Q04338 YFL066CYFL066C 1179 nt10.67□□□□□ -0.7
VTI1Q04338 MRPL8YJL063C 717 nt10.67□□□□□ -0.7
VTI1Q04338 ADO1YJR105W 1023 nt10.67□□□□□ -0.7
VTI1Q04338 SSN3YPL042C 1668 nt10.66□□□□□ -0.7
VTI1Q04338 ARP6YLR085C 1317 nt10.64□□□□□ -0.71
VTI1Q04338 VPS75YNL246W 795 nt10.61□□□□□ -0.71
VTI1Q04338 PRM5YIL117C 957 nt10.6□□□□□ -0.71
VTI1Q04338 YAT1YAR035W 2064 nt10.59□□□□□ -0.71
VTI1Q04338 HIF1YLL022C 1158 nt10.56□□□□□ -0.72
VTI1Q04338 SHH4YLR164W 507 nt10.54□□□□□ -0.72
VTI1Q04338 ALD4YOR374W 1560 nt10.54□□□□□ -0.72
VTI1Q04338 CMP2YML057W 1815 nt10.54□□□□□ -0.72
VTI1Q04338 UTR1YJR049C 1593 nt10.53□□□□□ -0.72
VTI1Q04338 TIR3YIL011W 810 nt10.52□□□□□ -0.73
VTI1Q04338 YFR018CYFR018C 1092 nt10.51□□□□□ -0.73
VTI1Q04338 GAP1YKR039W 1809 nt10.51□□□□□ -0.73
VTI1Q04338 PAU7YAR020C 168 nt10.5□□□□□ -0.73
VTI1Q04338 PRO1YDR300C 1287 nt10.49□□□□□ -0.73
VTI1Q04338 PRE6YOL038W 765 nt10.49□□□□□ -0.73
VTI1Q04338 LSC2YGR244C 1284 nt10.48□□□□□ -0.73
VTI1Q04338 BSP1YPR171W 1731 nt10.46□□□□□ -0.74
VTI1Q04338 POM34YLR018C 900 nt10.43□□□□□ -0.74
Retrieved 100 of 7,029 protein–RNA pairs in 24.3 ms