Protein–RNA interactions for Protein: P53960

YNL040W, Putative alanyl-tRNA editing protein alaX, yeastyeast

Predicted RBP Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YNL040WP53960 AQY1YPR192W 918 nt11.42□□□□□ -0.58
YNL040WP53960 YFL067WYFL067W 528 nt11.41□□□□□ -0.58
YNL040WP53960 WSC2YNL283C 1512 nt11.39□□□□□ -0.59
YNL040WP53960 AHT1YHR093W 549 nt11.38□□□□□ -0.59
YNL040WP53960 DDR2YOL052C-A 186 nt11.38□□□□□ -0.59
YNL040WP53960 YPR064WYPR064W 420 nt11.37□□□□□ -0.59
YNL040WP53960 HEM12YDR047W 1089 nt11.35□□□□□ -0.59
YNL040WP53960 STB1YNL309W 1263 nt11.35□□□□□ -0.59
YNL040WP53960 MIC10YCL057C-A 294 nt11.35□□□□□ -0.59
YNL040WP53960 SNG1YGR197C 1644 nt11.35□□□□□ -0.59
YNL040WP53960 YDL086C-AYDL086C-A 435 nt11.33□□□□□ -0.6
YNL040WP53960 SPC25YER018C 666 nt11.33□□□□□ -0.6
YNL040WP53960 YDR524C-BYDR524C-B 201 nt11.31□□□□□ -0.6
YNL040WP53960 TAD3YLR316C 969 nt11.3□□□□□ -0.6
YNL040WP53960 ANP1YEL036C 1503 nt11.3□□□□□ -0.6
YNL040WP53960 HSP60YLR259C 1719 nt11.28□□□□□ -0.6
YNL040WP53960 YHR056W-AYHR056W-A 435 nt11.27□□□□□ -0.61
YNL040WP53960 GPI16YHR188C 1833 nt11.26□□□□□ -0.61
YNL040WP53960 tL(GAG)GtL(GAG)G 82 nt11.26□□□□□ -0.61
YNL040WP53960 CCT4YDL143W 1587 nt11.25□□□□□ -0.61
YNL040WP53960 FEN2YCR028C 1539 nt11.24□□□□□ -0.61
YNL040WP53960 VPS60YDR486C 690 nt11.23□□□□□ -0.61
YNL040WP53960 UME6YDR207C 2511 nt11.18□□□□□ -0.62
YNL040WP53960 ALG3YBL082C 1377 nt11.18□□□□□ -0.62
YNL040WP53960 UBX6YJL048C 1191 nt11.18□□□□□ -0.62
YNL040WP53960 RAX1YOR301W 1308 nt11.17□□□□□ -0.62
YNL040WP53960 SWC5YBR231C 912 nt11.17□□□□□ -0.62
YNL040WP53960 BDH1YAL060W 1149 nt11.16□□□□□ -0.62
YNL040WP53960 YIR016WYIR016W 798 nt11.14□□□□□ -0.63
YNL040WP53960 GLK1YCL040W 1503 nt11.14□□□□□ -0.63
YNL040WP53960 FUR4YBR021W 1902 nt11.11□□□□□ -0.63
YNL040WP53960 BNA2YJR078W 1362 nt11.11□□□□□ -0.63
YNL040WP53960 CCA1YER168C 1641 nt11.1□□□□□ -0.63
YNL040WP53960 YLR415CYLR415C 339 nt11.1□□□□□ -0.63
YNL040WP53960 MIC12YBR262C 321 nt11.1□□□□□ -0.63
YNL040WP53960 YJL225CYJL225C 5277 nt11.09□□□□□ -0.63
YNL040WP53960 YSP3YOR003W 1437 nt11.08□□□□□ -0.64
YNL040WP53960 YDR094WYDR094W 336 nt11.06□□□□□ -0.64
YNL040WP53960 ALG12YNR030W 1656 nt11.05□□□□□ -0.64
YNL040WP53960 YFR018CYFR018C 1092 nt11.03□□□□□ -0.64
YNL040WP53960 MCH5YOR306C 1566 nt11□□□□□ -0.65
YNL040WP53960 PEX25YPL112C 1185 nt11□□□□□ -0.65
YNL040WP53960 YNL115CYNL115C 1935 nt10.99□□□□□ -0.65
YNL040WP53960 YFL066CYFL066C 1179 nt10.98□□□□□ -0.65
YNL040WP53960 HHO1YPL127C 777 nt10.98□□□□□ -0.65
YNL040WP53960 PRE6YOL038W 765 nt10.96□□□□□ -0.65
YNL040WP53960 XDJ1YLR090W 1380 nt10.94□□□□□ -0.66
YNL040WP53960 AGP1YCL025C 1902 nt10.94□□□□□ -0.66
YNL040WP53960 PRP4YPR178W 1398 nt10.93□□□□□ -0.66
YNL040WP53960 YGR201CYGR201C 678 nt10.93□□□□□ -0.66
YNL040WP53960 SHM2YLR058C 1410 nt10.91□□□□□ -0.66
YNL040WP53960 TIM17YJL143W 477 nt10.89□□□□□ -0.67
YNL040WP53960 GDH3YAL062W 1374 nt10.89□□□□□ -0.67
YNL040WP53960 DPS1YLL018C 1674 nt10.89□□□□□ -0.67
YNL040WP53960 RRT5YFR032C 870 nt10.88□□□□□ -0.67
YNL040WP53960 YFL015W-AYFL015W-A 318 nt10.86□□□□□ -0.67
YNL040WP53960 PAU16YKL224C 372 nt10.85□□□□□ -0.67
YNL040WP53960 VPS75YNL246W 795 nt10.85□□□□□ -0.67
YNL040WP53960 AAC1YMR056C 930 nt10.84□□□□□ -0.67
YNL040WP53960 DUT1YBR252W 444 nt10.82□□□□□ -0.68
YNL040WP53960 AVT6YER119C 1347 nt10.82□□□□□ -0.68
YNL040WP53960 YKR005CYKR005C 1578 nt10.82□□□□□ -0.68
YNL040WP53960 NIT1YIL164C 600 nt10.81□□□□□ -0.68
YNL040WP53960 SNF1YDR477W 1902 nt10.8□□□□□ -0.68
YNL040WP53960 GOR1YNL274C 1053 nt10.78□□□□□ -0.68
YNL040WP53960 BIO5YNR056C 1686 nt10.78□□□□□ -0.68
YNL040WP53960 NAR1YNL240C 1476 nt10.77□□□□□ -0.69
YNL040WP53960 DUS1YML080W 1272 nt10.77□□□□□ -0.69
YNL040WP53960 SGT2YOR007C 1041 nt10.76□□□□□ -0.69
YNL040WP53960 YCL074WYCL074W 927 nt10.73□□□□□ -0.69
YNL040WP53960 BMT6YLR063W 1098 nt10.72□□□□□ -0.69
YNL040WP53960 DAT1YML113W 747 nt10.72□□□□□ -0.69
YNL040WP53960 RDN37-1RDN37-1 5354 nt10.7□□□□□ -0.7
YNL040WP53960 RDN37-2RDN37-2 5354 nt10.7□□□□□ -0.7
YNL040WP53960 YGR259CYGR259C 441 nt10.69□□□□□ -0.7
YNL040WP53960 MIR1YJR077C 936 nt10.69□□□□□ -0.7
YNL040WP53960 STR3YGL184C 1398 nt10.68□□□□□ -0.7
YNL040WP53960 PAU7YAR020C 168 nt10.68□□□□□ -0.7
YNL040WP53960 RDN18-1RDN18-1 1800 nt10.67□□□□□ -0.7
YNL040WP53960 RDN18-2RDN18-2 1800 nt10.67□□□□□ -0.7
YNL040WP53960 PBP1YGR178C 2169 nt10.64□□□□□ -0.71
YNL040WP53960 YCR102CYCR102C 1107 nt10.63□□□□□ -0.71
YNL040WP53960 AQY2YLL052C 450 nt10.62□□□□□ -0.71
YNL040WP53960 SHB17YKR043C 816 nt10.61□□□□□ -0.71
YNL040WP53960 YDR010CYDR010C 333 nt10.6□□□□□ -0.71
YNL040WP53960 THI74YDR438W 1113 nt10.6□□□□□ -0.71
YNL040WP53960 NAT4YMR069W 858 nt10.6□□□□□ -0.71
YNL040WP53960 IRC24YIR036C 792 nt10.59□□□□□ -0.71
YNL040WP53960 NBP35YGL091C 987 nt10.58□□□□□ -0.72
YNL040WP53960 UBA4YHR111W 1323 nt10.56□□□□□ -0.72
YNL040WP53960 CYT2YKL087C 675 nt10.55□□□□□ -0.72
YNL040WP53960 MSF1YPR047W 1410 nt10.55□□□□□ -0.72
YNL040WP53960 SBA1YKL117W 651 nt10.51□□□□□ -0.73
YNL040WP53960 RET2YFR051C 1641 nt10.5□□□□□ -0.73
YNL040WP53960 YSR3YKR053C 1215 nt10.48□□□□□ -0.73
YNL040WP53960 RTN2YDL204W 1182 nt10.47□□□□□ -0.73
YNL040WP53960 TIR3YIL011W 810 nt10.46□□□□□ -0.73
YNL040WP53960 SHH4YLR164W 507 nt10.46□□□□□ -0.73
YNL040WP53960 PHO89YBR296C 1725 nt10.46□□□□□ -0.74
YNL040WP53960 SFA1YDL168W 1161 nt10.44□□□□□ -0.74
Retrieved 100 of 7,029 protein–RNA pairs in 15.5 ms