Protein–RNA interactions for Protein: P53950

VAC7, Vacuolar segregation protein 7, yeastyeast

Predictions only

Length 1,165 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VAC7P53950 TRM5YHR070W 1500 nt10.94□□□□□ -0.66
VAC7P53950 ATF2YGR177C 1608 nt10.94□□□□□ -0.66
VAC7P53950 BOP3YNL042W 1191 nt10.93□□□□□ -0.66
VAC7P53950 LYS4YDR234W 2082 nt10.93□□□□□ -0.66
VAC7P53950 CRR1YLR213C 1269 nt10.91□□□□□ -0.66
VAC7P53950 ERF2YLR246W 1080 nt10.91□□□□□ -0.66
VAC7P53950 SPC25YER018C 666 nt10.89□□□□□ -0.67
VAC7P53950 PRE6YOL038W 765 nt10.88□□□□□ -0.67
VAC7P53950 BDH1YAL060W 1149 nt10.87□□□□□ -0.67
VAC7P53950 STB1YNL309W 1263 nt10.86□□□□□ -0.67
VAC7P53950 YFL067WYFL067W 528 nt10.84□□□□□ -0.67
VAC7P53950 PAU16YKL224C 372 nt10.84□□□□□ -0.67
VAC7P53950 BOR1YNL275W 1731 nt10.83□□□□□ -0.68
VAC7P53950 YSP3YOR003W 1437 nt10.83□□□□□ -0.68
VAC7P53950 CCT4YDL143W 1587 nt10.82□□□□□ -0.68
VAC7P53950 YDR524C-BYDR524C-B 201 nt10.82□□□□□ -0.68
VAC7P53950 ANP1YEL036C 1503 nt10.82□□□□□ -0.68
VAC7P53950 PTK1YKL198C 1989 nt10.81□□□□□ -0.68
VAC7P53950 YDL086C-AYDL086C-A 435 nt10.8□□□□□ -0.68
VAC7P53950 DDR2YOL052C-A 186 nt10.8□□□□□ -0.68
VAC7P53950 SNG1YGR197C 1644 nt10.8□□□□□ -0.68
VAC7P53950 PEX25YPL112C 1185 nt10.79□□□□□ -0.68
VAC7P53950 GPI16YHR188C 1833 nt10.79□□□□□ -0.68
VAC7P53950 VPS60YDR486C 690 nt10.78□□□□□ -0.68
VAC7P53950 MIC10YCL057C-A 294 nt10.78□□□□□ -0.68
VAC7P53950 YFL066CYFL066C 1179 nt10.77□□□□□ -0.69
VAC7P53950 ALG3YBL082C 1377 nt10.77□□□□□ -0.69
VAC7P53950 FEN2YCR028C 1539 nt10.74□□□□□ -0.69
VAC7P53950 HEM12YDR047W 1089 nt10.73□□□□□ -0.69
VAC7P53950 RRT5YFR032C 870 nt10.73□□□□□ -0.69
VAC7P53950 YLR415CYLR415C 339 nt10.73□□□□□ -0.69
VAC7P53950 YNL115CYNL115C 1935 nt10.72□□□□□ -0.69
VAC7P53950 SWC5YBR231C 912 nt10.69□□□□□ -0.7
VAC7P53950 YHR056W-AYHR056W-A 435 nt10.64□□□□□ -0.71
VAC7P53950 YIR016WYIR016W 798 nt10.63□□□□□ -0.71
VAC7P53950 MCH5YOR306C 1566 nt10.63□□□□□ -0.71
VAC7P53950 SPT8YLR055C 1809 nt10.63□□□□□ -0.71
VAC7P53950 YFL054CYFL054C 1941 nt10.62□□□□□ -0.71
VAC7P53950 YJL225CYJL225C 5277 nt10.61□□□□□ -0.71
VAC7P53950 VPS75YNL246W 795 nt10.58□□□□□ -0.72
VAC7P53950 MIC12YBR262C 321 nt10.57□□□□□ -0.72
VAC7P53950 MIR1YJR077C 936 nt10.55□□□□□ -0.72
VAC7P53950 SBA1YKL117W 651 nt10.53□□□□□ -0.72
VAC7P53950 RAX1YOR301W 1308 nt10.49□□□□□ -0.73
VAC7P53950 SHM2YLR058C 1410 nt10.48□□□□□ -0.73
VAC7P53950 Q0182Q0182 405 nt10.47□□□□□ -0.73
VAC7P53950 TIM17YJL143W 477 nt10.47□□□□□ -0.73
VAC7P53950 NAT4YMR069W 858 nt10.47□□□□□ -0.73
VAC7P53950 XDJ1YLR090W 1380 nt10.47□□□□□ -0.73
VAC7P53950 BNA2YJR078W 1362 nt10.45□□□□□ -0.74
VAC7P53950 MSF1YPR047W 1410 nt10.44□□□□□ -0.74
VAC7P53950 THI74YDR438W 1113 nt10.44□□□□□ -0.74
VAC7P53950 GLK1YCL040W 1503 nt10.43□□□□□ -0.74
VAC7P53950 NIT1YIL164C 600 nt10.43□□□□□ -0.74
VAC7P53950 ALG12YNR030W 1656 nt10.42□□□□□ -0.74
VAC7P53950 YGR201CYGR201C 678 nt10.4□□□□□ -0.74
VAC7P53950 SWE1YJL187C 2460 nt10.38□□□□□ -0.75
VAC7P53950 AGP1YCL025C 1902 nt10.37□□□□□ -0.75
VAC7P53950 SGT2YOR007C 1041 nt10.37□□□□□ -0.75
VAC7P53950 GDH3YAL062W 1374 nt10.37□□□□□ -0.75
VAC7P53950 HHO1YPL127C 777 nt10.36□□□□□ -0.75
VAC7P53950 CCA1YER168C 1641 nt10.36□□□□□ -0.75
VAC7P53950 RDN37-1RDN37-1 5354 nt10.35□□□□□ -0.75
VAC7P53950 RDN37-2RDN37-2 5354 nt10.35□□□□□ -0.75
VAC7P53950 DAT1YML113W 747 nt10.35□□□□□ -0.75
VAC7P53950 YDR010CYDR010C 333 nt10.34□□□□□ -0.75
VAC7P53950 SHB17YKR043C 816 nt10.34□□□□□ -0.75
VAC7P53950 HSP60YLR259C 1719 nt10.33□□□□□ -0.76
VAC7P53950 UBA4YHR111W 1323 nt10.32□□□□□ -0.76
VAC7P53950 PAU7YAR020C 168 nt10.31□□□□□ -0.76
VAC7P53950 DUT1YBR252W 444 nt10.28□□□□□ -0.76
VAC7P53950 AVT6YER119C 1347 nt10.27□□□□□ -0.77
VAC7P53950 YGL034CYGL034C 366 nt10.25□□□□□ -0.77
VAC7P53950 RET2YFR051C 1641 nt10.24□□□□□ -0.77
VAC7P53950 YSR3YKR053C 1215 nt10.21□□□□□ -0.77
VAC7P53950 RPM1RPM1 483 nt10.18□□□□□ -0.78
VAC7P53950 GOR1YNL274C 1053 nt10.18□□□□□ -0.78
VAC7P53950 XYL2YLR070C 1071 nt10.17□□□□□ -0.78
VAC7P53950 PHO89YBR296C 1725 nt10.15□□□□□ -0.78
VAC7P53950 YCR102CYCR102C 1107 nt10.14□□□□□ -0.79
VAC7P53950 YMR244WYMR244W 1068 nt10.14□□□□□ -0.79
VAC7P53950 SFA1YDL168W 1161 nt10.13□□□□□ -0.79
VAC7P53950 NAR1YNL240C 1476 nt10.12□□□□□ -0.79
VAC7P53950 YCR087WYCR087W 516 nt10.1□□□□□ -0.79
VAC7P53950 NBP35YGL091C 987 nt10.1□□□□□ -0.79
VAC7P53950 COQ2YNR041C 1119 nt10.09□□□□□ -0.79
VAC7P53950 AIM45YPR004C 1035 nt10.09□□□□□ -0.79
VAC7P53950 RDN18-1RDN18-1 1800 nt10.09□□□□□ -0.79
VAC7P53950 RDN18-2RDN18-2 1800 nt10.09□□□□□ -0.79
VAC7P53950 GLR1YPL091W 1452 nt10.08□□□□□ -0.8
VAC7P53950 STR3YGL184C 1398 nt10.07□□□□□ -0.8
VAC7P53950 RBG1YAL036C 1110 nt10.07□□□□□ -0.8
VAC7P53950 SHH4YLR164W 507 nt10.07□□□□□ -0.8
VAC7P53950 NDI1YML120C 1542 nt10.07□□□□□ -0.8
VAC7P53950 FUR4YBR021W 1902 nt10.06□□□□□ -0.8
VAC7P53950 DUS1YML080W 1272 nt10.03□□□□□ -0.8
VAC7P53950 YCL074WYCL074W 927 nt10.02□□□□□ -0.81
VAC7P53950 TIR3YIL011W 810 nt10.02□□□□□ -0.81
VAC7P53950 YHL019W-AYHL019W-A 594 nt10.01□□□□□ -0.81
VAC7P53950 MRP20YDR405W 792 nt9.98□□□□□ -0.81
Retrieved 100 of 7,029 protein–RNA pairs in 49.9 ms