Protein–RNA interactions for Protein: P53540

SPC98, Spindle pole body component SPC98, yeastyeast

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SPC98P53540 BDH1YAL060W 1149 nt11.5□□□□□ -0.57
SPC98P53540 SBA1YKL117W 651 nt11.48□□□□□ -0.57
SPC98P53540 STB1YNL309W 1263 nt11.48□□□□□ -0.57
SPC98P53540 YSP3YOR003W 1437 nt11.48□□□□□ -0.57
SPC98P53540 SPC25YER018C 666 nt11.47□□□□□ -0.57
SPC98P53540 ATF2YGR177C 1608 nt11.46□□□□□ -0.57
SPC98P53540 YDR524C-BYDR524C-B 201 nt11.45□□□□□ -0.58
SPC98P53540 ERF2YLR246W 1080 nt11.45□□□□□ -0.58
SPC98P53540 YLR415CYLR415C 339 nt11.45□□□□□ -0.58
SPC98P53540 CCT4YDL143W 1587 nt11.45□□□□□ -0.58
SPC98P53540 YNL115CYNL115C 1935 nt11.44□□□□□ -0.58
SPC98P53540 YFL067WYFL067W 528 nt11.42□□□□□ -0.58
SPC98P53540 CRR1YLR213C 1269 nt11.42□□□□□ -0.58
SPC98P53540 DDR2YOL052C-A 186 nt11.42□□□□□ -0.58
SPC98P53540 GPI16YHR188C 1833 nt11.42□□□□□ -0.58
SPC98P53540 PCH2YBR186W 1695 nt11.4□□□□□ -0.58
SPC98P53540 VPS60YDR486C 690 nt11.39□□□□□ -0.59
SPC98P53540 SWC5YBR231C 912 nt11.38□□□□□ -0.59
SPC98P53540 NCP1YHR042W 2076 nt11.37□□□□□ -0.59
SPC98P53540 YDL086C-AYDL086C-A 435 nt11.36□□□□□ -0.59
SPC98P53540 NAT4YMR069W 858 nt11.35□□□□□ -0.59
SPC98P53540 GUT2YIL155C 1950 nt11.34□□□□□ -0.59
SPC98P53540 NVJ2YPR091C 2313 nt11.34□□□□□ -0.59
SPC98P53540 ALG3YBL082C 1377 nt11.34□□□□□ -0.59
SPC98P53540 ANP1YEL036C 1503 nt11.33□□□□□ -0.6
SPC98P53540 FEN2YCR028C 1539 nt11.32□□□□□ -0.6
SPC98P53540 SNG1YGR197C 1644 nt11.31□□□□□ -0.6
SPC98P53540 LYS4YDR234W 2082 nt11.3□□□□□ -0.6
SPC98P53540 GLK1YCL040W 1503 nt11.3□□□□□ -0.6
SPC98P53540 HEM12YDR047W 1089 nt11.27□□□□□ -0.61
SPC98P53540 MIR1YJR077C 936 nt11.27□□□□□ -0.61
SPC98P53540 VPS75YNL246W 795 nt11.27□□□□□ -0.61
SPC98P53540 MIC10YCL057C-A 294 nt11.26□□□□□ -0.61
SPC98P53540 SPT8YLR055C 1809 nt11.25□□□□□ -0.61
SPC98P53540 MSF1YPR047W 1410 nt11.25□□□□□ -0.61
SPC98P53540 BOP3YNL042W 1191 nt11.24□□□□□ -0.61
SPC98P53540 THI74YDR438W 1113 nt11.23□□□□□ -0.61
SPC98P53540 RTF1YGL244W 1677 nt11.22□□□□□ -0.61
SPC98P53540 YIR016WYIR016W 798 nt11.2□□□□□ -0.62
SPC98P53540 PIB2YGL023C 1908 nt11.19□□□□□ -0.62
SPC98P53540 TIM17YJL143W 477 nt11.14□□□□□ -0.63
SPC98P53540 PAU7YAR020C 168 nt11.11□□□□□ -0.63
SPC98P53540 DAT1YML113W 747 nt11.11□□□□□ -0.63
SPC98P53540 YHR056W-AYHR056W-A 435 nt11.1□□□□□ -0.63
SPC98P53540 SHM2YLR058C 1410 nt11.09□□□□□ -0.63
SPC98P53540 XDJ1YLR090W 1380 nt11.06□□□□□ -0.64
SPC98P53540 UBA4YHR111W 1323 nt11.05□□□□□ -0.64
SPC98P53540 BNA2YJR078W 1362 nt11.04□□□□□ -0.64
SPC98P53540 MIC12YBR262C 321 nt11.04□□□□□ -0.64
SPC98P53540 PTK1YKL198C 1989 nt11.03□□□□□ -0.64
SPC98P53540 SHB17YKR043C 816 nt11.03□□□□□ -0.64
SPC98P53540 YGL034CYGL034C 366 nt11.02□□□□□ -0.65
SPC98P53540 YMR244WYMR244W 1068 nt11□□□□□ -0.65
SPC98P53540 NIT1YIL164C 600 nt10.99□□□□□ -0.65
SPC98P53540 SGT2YOR007C 1041 nt10.99□□□□□ -0.65
SPC98P53540 RAX1YOR301W 1308 nt10.98□□□□□ -0.65
SPC98P53540 YSR3YKR053C 1215 nt10.97□□□□□ -0.65
SPC98P53540 GDH3YAL062W 1374 nt10.96□□□□□ -0.65
SPC98P53540 YDR010CYDR010C 333 nt10.96□□□□□ -0.65
SPC98P53540 GLR1YPL091W 1452 nt10.93□□□□□ -0.66
SPC98P53540 YGR201CYGR201C 678 nt10.93□□□□□ -0.66
SPC98P53540 XYL2YLR070C 1071 nt10.91□□□□□ -0.66
SPC98P53540 HHO1YPL127C 777 nt10.91□□□□□ -0.66
SPC98P53540 YJL225CYJL225C 5277 nt10.89□□□□□ -0.67
SPC98P53540 RET2YFR051C 1641 nt10.88□□□□□ -0.67
SPC98P53540 NDI1YML120C 1542 nt10.88□□□□□ -0.67
SPC98P53540 YFL054CYFL054C 1941 nt10.87□□□□□ -0.67
SPC98P53540 PHO89YBR296C 1725 nt10.87□□□□□ -0.67
SPC98P53540 RBG1YAL036C 1110 nt10.86□□□□□ -0.67
SPC98P53540 AVT6YER119C 1347 nt10.84□□□□□ -0.67
SPC98P53540 YCR087WYCR087W 516 nt10.84□□□□□ -0.67
SPC98P53540 AIM45YPR004C 1035 nt10.82□□□□□ -0.68
SPC98P53540 RBG2YGR173W 1107 nt10.79□□□□□ -0.68
SPC98P53540 GOR1YNL274C 1053 nt10.77□□□□□ -0.69
SPC98P53540 AGP1YCL025C 1902 nt10.77□□□□□ -0.69
SPC98P53540 DUT1YBR252W 444 nt10.75□□□□□ -0.69
SPC98P53540 CCA1YER168C 1641 nt10.75□□□□□ -0.69
SPC98P53540 YCR102CYCR102C 1107 nt10.72□□□□□ -0.69
SPC98P53540 MRP20YDR405W 792 nt10.72□□□□□ -0.69
SPC98P53540 COQ2YNR041C 1119 nt10.72□□□□□ -0.69
SPC98P53540 SFA1YDL168W 1161 nt10.7□□□□□ -0.7
SPC98P53540 SWE1YJL187C 2460 nt10.67□□□□□ -0.7
SPC98P53540 YMR226CYMR226C 804 nt10.66□□□□□ -0.7
SPC98P53540 YHL019W-AYHL019W-A 594 nt10.65□□□□□ -0.7
SPC98P53540 NBP35YGL091C 987 nt10.59□□□□□ -0.71
SPC98P53540 SHH4YLR164W 507 nt10.59□□□□□ -0.71
SPC98P53540 RPL4BYDR012W 1089 nt10.58□□□□□ -0.72
SPC98P53540 RPL4AYBR031W 1089 nt10.58□□□□□ -0.72
SPC98P53540 UME6YDR207C 2511 nt10.58□□□□□ -0.72
SPC98P53540 TIR3YIL011W 810 nt10.57□□□□□ -0.72
SPC98P53540 YLR111WYLR111W 333 nt10.56□□□□□ -0.72
SPC98P53540 DUS1YML080W 1272 nt10.55□□□□□ -0.72
SPC98P53540 RPS14BYJL191W 417 nt10.54□□□□□ -0.72
SPC98P53540 CLB6YGR109C 1143 nt10.53□□□□□ -0.72
SPC98P53540 RDN37-1RDN37-1 5354 nt10.53□□□□□ -0.72
SPC98P53540 RDN37-2RDN37-2 5354 nt10.53□□□□□ -0.72
SPC98P53540 BOR1YNL275W 1731 nt10.53□□□□□ -0.72
SPC98P53540 SAM1YLR180W 1149 nt10.51□□□□□ -0.73
SPC98P53540 TOM6YOR045W 186 nt10.51□□□□□ -0.73
SPC98P53540 SDH5YOL071W 489 nt10.5□□□□□ -0.73
Retrieved 100 of 7,029 protein–RNA pairs in 12.7 ms