Protein–RNA interactions for Protein: P47024

TY4B-J, Transposon Ty4-J Gag-Pol polyprotein, yeastyeast

Predictions only

Length 1,803 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY4B-JP47024 TRM5YHR070W 1500 nt14.42□□□□□ -0.1
TY4B-JP47024 GAL1YBR020W 1587 nt14.39□□□□□ -0.11
TY4B-JP47024 YDR524C-BYDR524C-B 201 nt14.38□□□□□ -0.11
TY4B-JP47024 VPS75YNL246W 795 nt14.36□□□□□ -0.11
TY4B-JP47024 YNL195CYNL195C 786 nt14.35□□□□□ -0.11
TY4B-JP47024 SWC5YBR231C 912 nt14.34□□□□□ -0.11
TY4B-JP47024 CCT4YDL143W 1587 nt14.31□□□□□ -0.12
TY4B-JP47024 SPC25YER018C 666 nt14.3□□□□□ -0.12
TY4B-JP47024 YHL050CYHL050C 2094 nt14.28□□□□□ -0.12
TY4B-JP47024 YMR244WYMR244W 1068 nt14.27□□□□□ -0.12
TY4B-JP47024 ALG3YBL082C 1377 nt14.27□□□□□ -0.13
TY4B-JP47024 GPI16YHR188C 1833 nt14.25□□□□□ -0.13
TY4B-JP47024 SIM1YIL123W 1431 nt14.25□□□□□ -0.13
TY4B-JP47024 THI74YDR438W 1113 nt14.25□□□□□ -0.13
TY4B-JP47024 STB1YNL309W 1263 nt14.25□□□□□ -0.13
TY4B-JP47024 DDR2YOL052C-A 186 nt14.22□□□□□ -0.13
TY4B-JP47024 VPS60YDR486C 690 nt14.21□□□□□ -0.13
TY4B-JP47024 CRR1YLR213C 1269 nt14.21□□□□□ -0.13
TY4B-JP47024 GLR1YPL091W 1452 nt14.19□□□□□ -0.14
TY4B-JP47024 YFL067WYFL067W 528 nt14.19□□□□□ -0.14
TY4B-JP47024 SPT8YLR055C 1809 nt14.18□□□□□ -0.14
TY4B-JP47024 RBG2YGR173W 1107 nt14.15□□□□□ -0.14
TY4B-JP47024 ERF2YLR246W 1080 nt14.15□□□□□ -0.14
TY4B-JP47024 ANP1YEL036C 1503 nt14.11□□□□□ -0.15
TY4B-JP47024 YDL086C-AYDL086C-A 435 nt14.08□□□□□ -0.15
TY4B-JP47024 MIC10YCL057C-A 294 nt14.08□□□□□ -0.15
TY4B-JP47024 DAT1YML113W 747 nt14.07□□□□□ -0.16
TY4B-JP47024 NDI1YML120C 1542 nt14.06□□□□□ -0.16
TY4B-JP47024 TIM17YJL143W 477 nt14.04□□□□□ -0.16
TY4B-JP47024 UBA4YHR111W 1323 nt14.01□□□□□ -0.17
TY4B-JP47024 SHB17YKR043C 816 nt14.01□□□□□ -0.17
TY4B-JP47024 PAU7YAR020C 168 nt14□□□□□ -0.17
TY4B-JP47024 SGT2YOR007C 1041 nt13.97□□□□□ -0.17
TY4B-JP47024 FEN2YCR028C 1539 nt13.96□□□□□ -0.17
TY4B-JP47024 RBG1YAL036C 1110 nt13.96□□□□□ -0.17
TY4B-JP47024 YDR010CYDR010C 333 nt13.94□□□□□ -0.18
TY4B-JP47024 YGL034CYGL034C 366 nt13.93□□□□□ -0.18
TY4B-JP47024 SNG1YGR197C 1644 nt13.93□□□□□ -0.18
TY4B-JP47024 XYL2YLR070C 1071 nt13.91□□□□□ -0.18
TY4B-JP47024 RAD51YER095W 1203 nt13.88□□□□□ -0.19
TY4B-JP47024 SHM2YLR058C 1410 nt13.85□□□□□ -0.19
TY4B-JP47024 YIR016WYIR016W 798 nt13.83□□□□□ -0.2
TY4B-JP47024 AIM45YPR004C 1035 nt13.8□□□□□ -0.2
TY4B-JP47024 RET2YFR051C 1641 nt13.79□□□□□ -0.2
TY4B-JP47024 NIT1YIL164C 600 nt13.79□□□□□ -0.2
TY4B-JP47024 LYS4YDR234W 2082 nt13.78□□□□□ -0.2
TY4B-JP47024 XDJ1YLR090W 1380 nt13.77□□□□□ -0.2
TY4B-JP47024 HEM12YDR047W 1089 nt13.76□□□□□ -0.21
TY4B-JP47024 PHO89YBR296C 1725 nt13.7□□□□□ -0.22
TY4B-JP47024 YSR3YKR053C 1215 nt13.69□□□□□ -0.22
TY4B-JP47024 CAB5YDR196C 726 nt13.67□□□□□ -0.22
TY4B-JP47024 SEC11YIR022W 504 nt13.67□□□□□ -0.22
TY4B-JP47024 NCP1YHR042W 2076 nt13.66□□□□□ -0.22
TY4B-JP47024 COQ2YNR041C 1119 nt13.63□□□□□ -0.23
TY4B-JP47024 BDF1YLR399C 2061 nt13.63□□□□□ -0.23
TY4B-JP47024 SAM1YLR180W 1149 nt13.62□□□□□ -0.23
TY4B-JP47024 SDH5YOL071W 489 nt13.62□□□□□ -0.23
TY4B-JP47024 YGR201CYGR201C 678 nt13.61□□□□□ -0.23
TY4B-JP47024 TAT1YBR069C 1860 nt13.6□□□□□ -0.23
TY4B-JP47024 YCR087WYCR087W 516 nt13.59□□□□□ -0.23
TY4B-JP47024 PCH2YBR186W 1695 nt13.59□□□□□ -0.23
TY4B-JP47024 MIC12YBR262C 321 nt13.58□□□□□ -0.24
TY4B-JP47024 YLR111WYLR111W 333 nt13.53□□□□□ -0.24
TY4B-JP47024 GDH3YAL062W 1374 nt13.49□□□□□ -0.25
TY4B-JP47024 RPS14BYJL191W 417 nt13.48□□□□□ -0.25
TY4B-JP47024 YHL019W-AYHL019W-A 594 nt13.48□□□□□ -0.25
TY4B-JP47024 SFA1YDL168W 1161 nt13.47□□□□□ -0.25
TY4B-JP47024 YNR029CYNR029C 1290 nt13.47□□□□□ -0.25
TY4B-JP47024 ADH7YCR105W 1086 nt13.46□□□□□ -0.25
TY4B-JP47024 BOP3YNL042W 1191 nt13.46□□□□□ -0.26
TY4B-JP47024 BNA2YJR078W 1362 nt13.45□□□□□ -0.26
TY4B-JP47024 AVT6YER119C 1347 nt13.44□□□□□ -0.26
TY4B-JP47024 RTF1YGL244W 1677 nt13.44□□□□□ -0.26
TY4B-JP47024 YLR349WYLR349W 507 nt13.43□□□□□ -0.26
TY4B-JP47024 YMR226CYMR226C 804 nt13.43□□□□□ -0.26
TY4B-JP47024 RPM1RPM1 483 nt13.42□□□□□ -0.26
TY4B-JP47024 YHR056W-AYHR056W-A 435 nt13.41□□□□□ -0.26
TY4B-JP47024 PIB2YGL023C 1908 nt13.4□□□□□ -0.26
TY4B-JP47024 GUT2YIL155C 1950 nt13.4□□□□□ -0.26
TY4B-JP47024 YLR437C-AYLR437C-A 228 nt13.39□□□□□ -0.27
TY4B-JP47024 MRP20YDR405W 792 nt13.39□□□□□ -0.27
TY4B-JP47024 YLR279WYLR279W 390 nt13.37□□□□□ -0.27
TY4B-JP47024 HHO1YPL127C 777 nt13.36□□□□□ -0.27
TY4B-JP47024 AGP1YCL025C 1902 nt13.34□□□□□ -0.27
TY4B-JP47024 RPL4BYDR012W 1089 nt13.31□□□□□ -0.28
TY4B-JP47024 RPL4AYBR031W 1089 nt13.31□□□□□ -0.28
TY4B-JP47024 STE4YOR212W 1272 nt13.29□□□□□ -0.28
TY4B-JP47024 SHH4YLR164W 507 nt13.25□□□□□ -0.29
TY4B-JP47024 YGR012WYGR012W 1182 nt13.25□□□□□ -0.29
TY4B-JP47024 PAU15YIR041W 375 nt13.25□□□□□ -0.29
TY4B-JP47024 RAD23YEL037C 1197 nt13.22□□□□□ -0.29
TY4B-JP47024 MSB4YOL112W 1479 nt13.18□□□□□ -0.3
TY4B-JP47024 DUT1YBR252W 444 nt13.18□□□□□ -0.3
TY4B-JP47024 YFL054CYFL054C 1941 nt13.17□□□□□ -0.3
TY4B-JP47024 PTK1YKL198C 1989 nt13.17□□□□□ -0.3
TY4B-JP47024 CCA1YER168C 1641 nt13.15□□□□□ -0.3
TY4B-JP47024 NRT1YOR071C 1797 nt13.14□□□□□ -0.31
TY4B-JP47024 GOR1YNL274C 1053 nt13.14□□□□□ -0.31
TY4B-JP47024 TSC10YBR265W 963 nt13.14□□□□□ -0.31
TY4B-JP47024 YCR102CYCR102C 1107 nt13.13□□□□□ -0.31
Retrieved 100 of 7,029 protein–RNA pairs in 39.3 ms