Protein–RNA interactions for Protein: P40505

SDS3, Transcriptional regulatory protein SDS3, yeastyeast

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SDS3P40505 MIC10YCL057C-A 294 nt11.8□□□□□ -0.52
SDS3P40505 AQY1YPR192W 918 nt11.78□□□□□ -0.52
SDS3P40505 SNG1YGR197C 1644 nt11.77□□□□□ -0.53
SDS3P40505 SPT8YLR055C 1809 nt11.76□□□□□ -0.53
SDS3P40505 YPR064WYPR064W 420 nt11.74□□□□□ -0.53
SDS3P40505 YDL086C-AYDL086C-A 435 nt11.73□□□□□ -0.53
SDS3P40505 YDR524C-BYDR524C-B 201 nt11.73□□□□□ -0.53
SDS3P40505 STB1YNL309W 1263 nt11.73□□□□□ -0.53
SDS3P40505 HUA1YGR268C 597 nt11.72□□□□□ -0.53
SDS3P40505 WSC2YNL283C 1512 nt11.71□□□□□ -0.53
SDS3P40505 YHR056W-AYHR056W-A 435 nt11.69□□□□□ -0.54
SDS3P40505 AHT1YHR093W 549 nt11.69□□□□□ -0.54
SDS3P40505 SPC25YER018C 666 nt11.67□□□□□ -0.54
SDS3P40505 GPI16YHR188C 1833 nt11.66□□□□□ -0.54
SDS3P40505 ANP1YEL036C 1503 nt11.65□□□□□ -0.54
SDS3P40505 UME6YDR207C 2511 nt11.64□□□□□ -0.55
SDS3P40505 TAD3YLR316C 969 nt11.64□□□□□ -0.55
SDS3P40505 FEN2YCR028C 1539 nt11.64□□□□□ -0.55
SDS3P40505 CCT4YDL143W 1587 nt11.62□□□□□ -0.55
SDS3P40505 RAX1YOR301W 1308 nt11.62□□□□□ -0.55
SDS3P40505 VPS60YDR486C 690 nt11.62□□□□□ -0.55
SDS3P40505 SWC5YBR231C 912 nt11.62□□□□□ -0.55
SDS3P40505 BNA2YJR078W 1362 nt11.61□□□□□ -0.55
SDS3P40505 SWE1YJL187C 2460 nt11.61□□□□□ -0.55
SDS3P40505 tL(GAG)GtL(GAG)G 82 nt11.59□□□□□ -0.55
SDS3P40505 ALG3YBL082C 1377 nt11.54□□□□□ -0.56
SDS3P40505 YDR094WYDR094W 336 nt11.54□□□□□ -0.56
SDS3P40505 YFL015W-AYFL015W-A 318 nt11.54□□□□□ -0.56
SDS3P40505 YIR016WYIR016W 798 nt11.54□□□□□ -0.56
SDS3P40505 CCA1YER168C 1641 nt11.49□□□□□ -0.57
SDS3P40505 YLR415CYLR415C 339 nt11.47□□□□□ -0.57
SDS3P40505 BDH1YAL060W 1149 nt11.46□□□□□ -0.57
SDS3P40505 MIC12YBR262C 321 nt11.45□□□□□ -0.58
SDS3P40505 HHO1YPL127C 777 nt11.44□□□□□ -0.58
SDS3P40505 YSP3YOR003W 1437 nt11.36□□□□□ -0.59
SDS3P40505 XDJ1YLR090W 1380 nt11.35□□□□□ -0.59
SDS3P40505 DUS1YML080W 1272 nt11.34□□□□□ -0.59
SDS3P40505 AGP1YCL025C 1902 nt11.34□□□□□ -0.59
SDS3P40505 YGR201CYGR201C 678 nt11.33□□□□□ -0.6
SDS3P40505 YNL115CYNL115C 1935 nt11.33□□□□□ -0.6
SDS3P40505 GDH3YAL062W 1374 nt11.3□□□□□ -0.6
SDS3P40505 YFL066CYFL066C 1179 nt11.3□□□□□ -0.6
SDS3P40505 PEX25YPL112C 1185 nt11.3□□□□□ -0.6
SDS3P40505 TIM17YJL143W 477 nt11.29□□□□□ -0.6
SDS3P40505 AVT6YER119C 1347 nt11.28□□□□□ -0.6
SDS3P40505 SHM2YLR058C 1410 nt11.27□□□□□ -0.6
SDS3P40505 FUR4YBR021W 1902 nt11.27□□□□□ -0.61
SDS3P40505 YFR018CYFR018C 1092 nt11.25□□□□□ -0.61
SDS3P40505 GOR1YNL274C 1053 nt11.24□□□□□ -0.61
SDS3P40505 BOR1YNL275W 1731 nt11.23□□□□□ -0.61
SDS3P40505 PRE6YOL038W 765 nt11.23□□□□□ -0.61
SDS3P40505 DUT1YBR252W 444 nt11.23□□□□□ -0.61
SDS3P40505 SBA1YKL117W 651 nt11.21□□□□□ -0.61
SDS3P40505 HSP60YLR259C 1719 nt11.2□□□□□ -0.62
SDS3P40505 GLK1YCL040W 1503 nt11.19□□□□□ -0.62
SDS3P40505 RPM1RPM1 483 nt11.18□□□□□ -0.62
SDS3P40505 YCL074WYCL074W 927 nt11.17□□□□□ -0.62
SDS3P40505 RRT5YFR032C 870 nt11.16□□□□□ -0.62
SDS3P40505 VPS75YNL246W 795 nt11.15□□□□□ -0.62
SDS3P40505 SGT2YOR007C 1041 nt11.15□□□□□ -0.62
SDS3P40505 AQY2YLL052C 450 nt11.13□□□□□ -0.63
SDS3P40505 NIT1YIL164C 600 nt11.12□□□□□ -0.63
SDS3P40505 PAU16YKL224C 372 nt11.1□□□□□ -0.63
SDS3P40505 PAU7YAR020C 168 nt11.1□□□□□ -0.63
SDS3P40505 STR3YGL184C 1398 nt11.09□□□□□ -0.63
SDS3P40505 RDN18-1RDN18-1 1800 nt11.08□□□□□ -0.64
SDS3P40505 RDN18-2RDN18-2 1800 nt11.08□□□□□ -0.64
SDS3P40505 PRP4YPR178W 1398 nt11.06□□□□□ -0.64
SDS3P40505 DAT1YML113W 747 nt11.03□□□□□ -0.64
SDS3P40505 YKR005CYKR005C 1578 nt11.03□□□□□ -0.64
SDS3P40505 MCH5YOR306C 1566 nt11.01□□□□□ -0.65
SDS3P40505 YCR102CYCR102C 1107 nt11□□□□□ -0.65
SDS3P40505 BMT6YLR063W 1098 nt10.99□□□□□ -0.65
SDS3P40505 DPS1YLL018C 1674 nt10.98□□□□□ -0.65
SDS3P40505 YGR259CYGR259C 441 nt10.98□□□□□ -0.65
SDS3P40505 MIR1YJR077C 936 nt10.95□□□□□ -0.66
SDS3P40505 SHB17YKR043C 816 nt10.94□□□□□ -0.66
SDS3P40505 NBP35YGL091C 987 nt10.92□□□□□ -0.66
SDS3P40505 NAT4YMR069W 858 nt10.91□□□□□ -0.66
SDS3P40505 THI74YDR438W 1113 nt10.9□□□□□ -0.66
SDS3P40505 AAC1YMR056C 930 nt10.89□□□□□ -0.67
SDS3P40505 RTN2YDL204W 1182 nt10.87□□□□□ -0.67
SDS3P40505 YDR010CYDR010C 333 nt10.87□□□□□ -0.67
SDS3P40505 UBA4YHR111W 1323 nt10.85□□□□□ -0.67
SDS3P40505 MSF1YPR047W 1410 nt10.83□□□□□ -0.68
SDS3P40505 YSR3YKR053C 1215 nt10.82□□□□□ -0.68
SDS3P40505 PHO89YBR296C 1725 nt10.81□□□□□ -0.68
SDS3P40505 SHH4YLR164W 507 nt10.81□□□□□ -0.68
SDS3P40505 Q0182Q0182 405 nt10.8□□□□□ -0.68
SDS3P40505 RET2YFR051C 1641 nt10.8□□□□□ -0.68
SDS3P40505 YHL019W-AYHL019W-A 594 nt10.79□□□□□ -0.68
SDS3P40505 TIR3YIL011W 810 nt10.79□□□□□ -0.68
SDS3P40505 SNF1YDR477W 1902 nt10.78□□□□□ -0.68
SDS3P40505 PLB1YMR008C 1995 nt10.78□□□□□ -0.68
SDS3P40505 IRC24YIR036C 792 nt10.78□□□□□ -0.68
SDS3P40505 SFA1YDL168W 1161 nt10.75□□□□□ -0.69
SDS3P40505 ARP6YLR085C 1317 nt10.75□□□□□ -0.69
SDS3P40505 ALG12YNR030W 1656 nt10.75□□□□□ -0.69
SDS3P40505 PRO1YDR300C 1287 nt10.74□□□□□ -0.69
SDS3P40505 XYL2YLR070C 1071 nt10.74□□□□□ -0.69
Retrieved 100 of 7,029 protein–RNA pairs in 28 ms