Protein–RNA interactions for Protein: P38848

PEX28, Peroxisomal membrane protein PEX28, yeastyeast

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PEX28P38848 MIR1YJR077C 936 nt11.23□□□□□ -0.61
PEX28P38848 YMR244WYMR244W 1068 nt11.22□□□□□ -0.61
PEX28P38848 GAL1YBR020W 1587 nt11.21□□□□□ -0.61
PEX28P38848 BIO4YNR057C 714 nt11.2□□□□□ -0.62
PEX28P38848 YBR220CYBR220C 1683 nt11.19□□□□□ -0.62
PEX28P38848 VPS75YNL246W 795 nt11.18□□□□□ -0.62
PEX28P38848 CCT4YDL143W 1587 nt11.16□□□□□ -0.62
PEX28P38848 SPC25YER018C 666 nt11.16□□□□□ -0.62
PEX28P38848 STB1YNL309W 1263 nt11.16□□□□□ -0.62
PEX28P38848 TRM5YHR070W 1500 nt11.14□□□□□ -0.63
PEX28P38848 SIM1YIL123W 1431 nt11.13□□□□□ -0.63
PEX28P38848 GPI16YHR188C 1833 nt11.12□□□□□ -0.63
PEX28P38848 GLR1YPL091W 1452 nt11.12□□□□□ -0.63
PEX28P38848 PAC11YDR488C 1602 nt11.1□□□□□ -0.63
PEX28P38848 YDR524C-BYDR524C-B 201 nt11.1□□□□□ -0.63
PEX28P38848 SWC5YBR231C 912 nt11.1□□□□□ -0.63
PEX28P38848 NVJ2YPR091C 2313 nt11.1□□□□□ -0.63
PEX28P38848 DAT1YML113W 747 nt11.07□□□□□ -0.64
PEX28P38848 DDR2YOL052C-A 186 nt11.06□□□□□ -0.64
PEX28P38848 RRT12YCR045C 1476 nt11.06□□□□□ -0.64
PEX28P38848 VPS60YDR486C 690 nt11.05□□□□□ -0.64
PEX28P38848 YFL067WYFL067W 528 nt11.04□□□□□ -0.64
PEX28P38848 SPT8YLR055C 1809 nt11.02□□□□□ -0.64
PEX28P38848 RBG2YGR173W 1107 nt11.02□□□□□ -0.65
PEX28P38848 PAU7YAR020C 168 nt11.02□□□□□ -0.65
PEX28P38848 YGL034CYGL034C 366 nt11.01□□□□□ -0.65
PEX28P38848 ERF2YLR246W 1080 nt11.01□□□□□ -0.65
PEX28P38848 ATF2YGR177C 1608 nt11.01□□□□□ -0.65
PEX28P38848 BDF1YLR399C 2061 nt11□□□□□ -0.65
PEX28P38848 ALG3YBL082C 1377 nt11□□□□□ -0.65
PEX28P38848 YDL086C-AYDL086C-A 435 nt10.98□□□□□ -0.65
PEX28P38848 FEN2YCR028C 1539 nt10.96□□□□□ -0.65
PEX28P38848 UBA4YHR111W 1323 nt10.96□□□□□ -0.65
PEX28P38848 ANP1YEL036C 1503 nt10.94□□□□□ -0.66
PEX28P38848 NDI1YML120C 1542 nt10.94□□□□□ -0.66
PEX28P38848 YHL050CYHL050C 2094 nt10.93□□□□□ -0.66
PEX28P38848 CRR1YLR213C 1269 nt10.93□□□□□ -0.66
PEX28P38848 TIM17YJL143W 477 nt10.91□□□□□ -0.66
PEX28P38848 YSR3YKR053C 1215 nt10.91□□□□□ -0.66
PEX28P38848 SHB17YKR043C 816 nt10.9□□□□□ -0.66
PEX28P38848 RBG1YAL036C 1110 nt10.86□□□□□ -0.67
PEX28P38848 YIR016WYIR016W 798 nt10.84□□□□□ -0.67
PEX28P38848 TAT1YBR069C 1860 nt10.84□□□□□ -0.67
PEX28P38848 SNG1YGR197C 1644 nt10.84□□□□□ -0.67
PEX28P38848 XYL2YLR070C 1071 nt10.83□□□□□ -0.68
PEX28P38848 YMR226CYMR226C 804 nt10.83□□□□□ -0.68
PEX28P38848 YCR087WYCR087W 516 nt10.81□□□□□ -0.68
PEX28P38848 HEM12YDR047W 1089 nt10.81□□□□□ -0.68
PEX28P38848 YDR010CYDR010C 333 nt10.79□□□□□ -0.68
PEX28P38848 SHM2YLR058C 1410 nt10.77□□□□□ -0.68
PEX28P38848 SAM1YLR180W 1149 nt10.76□□□□□ -0.69
PEX28P38848 SEC11YIR022W 504 nt10.75□□□□□ -0.69
PEX28P38848 AIM45YPR004C 1035 nt10.75□□□□□ -0.69
PEX28P38848 MIC10YCL057C-A 294 nt10.75□□□□□ -0.69
PEX28P38848 RET2YFR051C 1641 nt10.75□□□□□ -0.69
PEX28P38848 PHO89YBR296C 1725 nt10.73□□□□□ -0.69
PEX28P38848 CSM2YIL132C 642 nt10.73□□□□□ -0.69
PEX28P38848 XDJ1YLR090W 1380 nt10.71□□□□□ -0.69
PEX28P38848 SGT2YOR007C 1041 nt10.71□□□□□ -0.69
PEX28P38848 NIT1YIL164C 600 nt10.68□□□□□ -0.7
PEX28P38848 LYS4YDR234W 2082 nt10.68□□□□□ -0.7
PEX28P38848 NCP1YHR042W 2076 nt10.65□□□□□ -0.7
PEX28P38848 YLR111WYLR111W 333 nt10.63□□□□□ -0.71
PEX28P38848 MRP20YDR405W 792 nt10.62□□□□□ -0.71
PEX28P38848 BNA2YJR078W 1362 nt10.62□□□□□ -0.71
PEX28P38848 GDH3YAL062W 1374 nt10.62□□□□□ -0.71
PEX28P38848 MIC12YBR262C 321 nt10.59□□□□□ -0.71
PEX28P38848 COQ2YNR041C 1119 nt10.56□□□□□ -0.72
PEX28P38848 RAD51YER095W 1203 nt10.55□□□□□ -0.72
PEX28P38848 PCH2YBR186W 1695 nt10.54□□□□□ -0.72
PEX28P38848 YGR201CYGR201C 678 nt10.54□□□□□ -0.72
PEX28P38848 YHR056W-AYHR056W-A 435 nt10.54□□□□□ -0.72
PEX28P38848 RPM1RPM1 483 nt10.54□□□□□ -0.72
PEX28P38848 YJL225CYJL225C 5277 nt10.53□□□□□ -0.72
PEX28P38848 MET8YBR213W 825 nt10.52□□□□□ -0.73
PEX28P38848 BOP3YNL042W 1191 nt10.5□□□□□ -0.73
PEX28P38848 RPL4BYDR012W 1089 nt10.48□□□□□ -0.73
PEX28P38848 RPL4AYBR031W 1089 nt10.48□□□□□ -0.73
PEX28P38848 HHO1YPL127C 777 nt10.47□□□□□ -0.73
PEX28P38848 RAX1YOR301W 1308 nt10.47□□□□□ -0.73
PEX28P38848 RDN37-1RDN37-1 5354 nt10.47□□□□□ -0.73
PEX28P38848 RDN37-2RDN37-2 5354 nt10.47□□□□□ -0.73
PEX28P38848 SFA1YDL168W 1161 nt10.46□□□□□ -0.73
PEX28P38848 AVT6YER119C 1347 nt10.45□□□□□ -0.74
PEX28P38848 RAD23YEL037C 1197 nt10.45□□□□□ -0.74
PEX28P38848 SDH5YOL071W 489 nt10.45□□□□□ -0.74
PEX28P38848 GUT2YIL155C 1950 nt10.45□□□□□ -0.74
PEX28P38848 STE4YOR212W 1272 nt10.44□□□□□ -0.74
PEX28P38848 CLB6YGR109C 1143 nt10.43□□□□□ -0.74
PEX28P38848 YNR029CYNR029C 1290 nt10.43□□□□□ -0.74
PEX28P38848 YCR102CYCR102C 1107 nt10.42□□□□□ -0.74
PEX28P38848 YHL019W-AYHL019W-A 594 nt10.41□□□□□ -0.74
PEX28P38848 YLR349WYLR349W 507 nt10.41□□□□□ -0.74
PEX28P38848 RTF1YGL244W 1677 nt10.41□□□□□ -0.74
PEX28P38848 RPS14BYJL191W 417 nt10.4□□□□□ -0.74
PEX28P38848 YLR437C-AYLR437C-A 228 nt10.39□□□□□ -0.75
PEX28P38848 GOR1YNL274C 1053 nt10.39□□□□□ -0.75
PEX28P38848 UTH1YKR042W 1098 nt10.34□□□□□ -0.75
PEX28P38848 PAU21YOR394W 495 nt10.34□□□□□ -0.75
PEX28P38848 PAU22YPL282C 495 nt10.34□□□□□ -0.75
Retrieved 100 of 7,029 protein–RNA pairs in 13.7 ms