Protein–RNA interactions for Protein: P38272

SHE3, SWI5-dependent HO expression protein 3, yeastyeast

Known RBP Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SHE3P38272 YJL225CYJL225C 5277 nt11.46□□□□□ -0.58
SHE3P38272 PAU16YKL224C 372 nt11.45□□□□□ -0.58
SHE3P38272 GPI16YHR188C 1833 nt11.44□□□□□ -0.58
SHE3P38272 GUT2YIL155C 1950 nt11.43□□□□□ -0.58
SHE3P38272 ATF2YGR177C 1608 nt11.43□□□□□ -0.58
SHE3P38272 CCT4YDL143W 1587 nt11.42□□□□□ -0.58
SHE3P38272 YDR524C-BYDR524C-B 201 nt11.42□□□□□ -0.58
SHE3P38272 YLR415CYLR415C 339 nt11.42□□□□□ -0.58
SHE3P38272 CRR1YLR213C 1269 nt11.41□□□□□ -0.58
SHE3P38272 PRE6YOL038W 765 nt11.4□□□□□ -0.58
SHE3P38272 PEX25YPL112C 1185 nt11.4□□□□□ -0.58
SHE3P38272 YDL086C-AYDL086C-A 435 nt11.39□□□□□ -0.59
SHE3P38272 BDH1YAL060W 1149 nt11.39□□□□□ -0.59
SHE3P38272 BOP3YNL042W 1191 nt11.39□□□□□ -0.59
SHE3P38272 SWC5YBR231C 912 nt11.38□□□□□ -0.59
SHE3P38272 NCP1YHR042W 2076 nt11.38□□□□□ -0.59
SHE3P38272 YSP3YOR003W 1437 nt11.35□□□□□ -0.59
SHE3P38272 RTF1YGL244W 1677 nt11.34□□□□□ -0.59
SHE3P38272 YFL066CYFL066C 1179 nt11.34□□□□□ -0.59
SHE3P38272 HEM12YDR047W 1089 nt11.33□□□□□ -0.6
SHE3P38272 VPS60YDR486C 690 nt11.33□□□□□ -0.6
SHE3P38272 FEN2YCR028C 1539 nt11.32□□□□□ -0.6
SHE3P38272 ANP1YEL036C 1503 nt11.32□□□□□ -0.6
SHE3P38272 YNL115CYNL115C 1935 nt11.31□□□□□ -0.6
SHE3P38272 SNG1YGR197C 1644 nt11.29□□□□□ -0.6
SHE3P38272 LYS4YDR234W 2082 nt11.28□□□□□ -0.6
SHE3P38272 RDN37-1RDN37-1 5354 nt11.25□□□□□ -0.61
SHE3P38272 RDN37-2RDN37-2 5354 nt11.25□□□□□ -0.61
SHE3P38272 ALG3YBL082C 1377 nt11.24□□□□□ -0.61
SHE3P38272 NAT4YMR069W 858 nt11.23□□□□□ -0.61
SHE3P38272 VPS75YNL246W 795 nt11.22□□□□□ -0.61
SHE3P38272 GLK1YCL040W 1503 nt11.22□□□□□ -0.61
SHE3P38272 MIC10YCL057C-A 294 nt11.22□□□□□ -0.61
SHE3P38272 PIB2YGL023C 1908 nt11.21□□□□□ -0.61
SHE3P38272 YIR016WYIR016W 798 nt11.21□□□□□ -0.61
SHE3P38272 SPT8YLR055C 1809 nt11.21□□□□□ -0.62
SHE3P38272 BNA2YJR078W 1362 nt11.16□□□□□ -0.62
SHE3P38272 TIM17YJL143W 477 nt11.15□□□□□ -0.62
SHE3P38272 PTK1YKL198C 1989 nt11.11□□□□□ -0.63
SHE3P38272 YHR056W-AYHR056W-A 435 nt11.11□□□□□ -0.63
SHE3P38272 PAU7YAR020C 168 nt11.11□□□□□ -0.63
SHE3P38272 THI74YDR438W 1113 nt11.1□□□□□ -0.63
SHE3P38272 MIR1YJR077C 936 nt11.1□□□□□ -0.63
SHE3P38272 SBA1YKL117W 651 nt11.1□□□□□ -0.63
SHE3P38272 MSF1YPR047W 1410 nt11.09□□□□□ -0.63
SHE3P38272 PAC11YDR488C 1602 nt11.08□□□□□ -0.64
SHE3P38272 RAX1YOR301W 1308 nt11.07□□□□□ -0.64
SHE3P38272 MIC12YBR262C 321 nt11.05□□□□□ -0.64
SHE3P38272 NVJ2YPR091C 2313 nt11.04□□□□□ -0.64
SHE3P38272 XDJ1YLR090W 1380 nt11.03□□□□□ -0.64
SHE3P38272 SHM2YLR058C 1410 nt11.02□□□□□ -0.64
SHE3P38272 YFL054CYFL054C 1941 nt11.01□□□□□ -0.65
SHE3P38272 YGR201CYGR201C 678 nt10.99□□□□□ -0.65
SHE3P38272 HHO1YPL127C 777 nt10.98□□□□□ -0.65
SHE3P38272 GDH3YAL062W 1374 nt10.97□□□□□ -0.65
SHE3P38272 DAT1YML113W 747 nt10.96□□□□□ -0.65
SHE3P38272 UBA4YHR111W 1323 nt10.93□□□□□ -0.66
SHE3P38272 SHB17YKR043C 816 nt10.92□□□□□ -0.66
SHE3P38272 SGT2YOR007C 1041 nt10.92□□□□□ -0.66
SHE3P38272 NIT1YIL164C 600 nt10.91□□□□□ -0.66
SHE3P38272 YGL034CYGL034C 366 nt10.88□□□□□ -0.67
SHE3P38272 YSR3YKR053C 1215 nt10.88□□□□□ -0.67
SHE3P38272 AVT6YER119C 1347 nt10.86□□□□□ -0.67
SHE3P38272 GOR1YNL274C 1053 nt10.85□□□□□ -0.67
SHE3P38272 YCR087WYCR087W 516 nt10.83□□□□□ -0.68
SHE3P38272 YDR010CYDR010C 333 nt10.83□□□□□ -0.68
SHE3P38272 RET2YFR051C 1641 nt10.8□□□□□ -0.68
SHE3P38272 GLR1YPL091W 1452 nt10.79□□□□□ -0.68
SHE3P38272 PHO89YBR296C 1725 nt10.78□□□□□ -0.68
SHE3P38272 CCA1YER168C 1641 nt10.77□□□□□ -0.68
SHE3P38272 XYL2YLR070C 1071 nt10.77□□□□□ -0.69
SHE3P38272 NDI1YML120C 1542 nt10.76□□□□□ -0.69
SHE3P38272 YCR102CYCR102C 1107 nt10.76□□□□□ -0.69
SHE3P38272 YMR244WYMR244W 1068 nt10.76□□□□□ -0.69
SHE3P38272 SWE1YJL187C 2460 nt10.75□□□□□ -0.69
SHE3P38272 RBG1YAL036C 1110 nt10.74□□□□□ -0.69
SHE3P38272 AGP1YCL025C 1902 nt10.72□□□□□ -0.69
SHE3P38272 MRP20YDR405W 792 nt10.71□□□□□ -0.69
SHE3P38272 AIM45YPR004C 1035 nt10.71□□□□□ -0.69
SHE3P38272 DUT1YBR252W 444 nt10.66□□□□□ -0.7
SHE3P38272 DUS1YML080W 1272 nt10.65□□□□□ -0.7
SHE3P38272 COQ2YNR041C 1119 nt10.62□□□□□ -0.71
SHE3P38272 SFA1YDL168W 1161 nt10.6□□□□□ -0.71
SHE3P38272 RBG2YGR173W 1107 nt10.6□□□□□ -0.71
SHE3P38272 YHL019W-AYHL019W-A 594 nt10.6□□□□□ -0.71
SHE3P38272 YMR226CYMR226C 804 nt10.58□□□□□ -0.72
SHE3P38272 RPL4BYDR012W 1089 nt10.57□□□□□ -0.72
SHE3P38272 NBP35YGL091C 987 nt10.57□□□□□ -0.72
SHE3P38272 TIR3YIL011W 810 nt10.57□□□□□ -0.72
SHE3P38272 RPL4AYBR031W 1089 nt10.57□□□□□ -0.72
SHE3P38272 CLB6YGR109C 1143 nt10.56□□□□□ -0.72
SHE3P38272 YCL074WYCL074W 927 nt10.55□□□□□ -0.72
SHE3P38272 AQY2YLL052C 450 nt10.53□□□□□ -0.72
SHE3P38272 STR3YGL184C 1398 nt10.52□□□□□ -0.72
SHE3P38272 YLR111WYLR111W 333 nt10.5□□□□□ -0.73
SHE3P38272 LSC2YGR244C 1284 nt10.49□□□□□ -0.73
SHE3P38272 UTH1YKR042W 1098 nt10.48□□□□□ -0.73
SHE3P38272 YML089CYML089C 369 nt10.48□□□□□ -0.73
SHE3P38272 SHH4YLR164W 507 nt10.47□□□□□ -0.73
SHE3P38272 SDH5YOL071W 489 nt10.46□□□□□ -0.73
Retrieved 100 of 7,029 protein–RNA pairs in 43.4 ms