Protein–RNA interactions for Protein: P18898

CDC43, Geranylgeranyl transferase type-1 subunit beta, yeastyeast

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CDC43P18898 TCD2YKL027W 1344 nt7.9□□□□□ -1.14
CDC43P18898 GBP2YCL011C 1284 nt7.9□□□□□ -1.14
CDC43P18898 HMG2YLR450W 3138 nt7.89□□□□□ -1.15
CDC43P18898 ERF2YLR246W 1080 nt7.89□□□□□ -1.15
CDC43P18898 FMT1YBL013W 1206 nt7.89□□□□□ -1.15
CDC43P18898 REG2YBR050C 1017 nt7.89□□□□□ -1.15
CDC43P18898 YGL114WYGL114W 2178 nt7.88□□□□□ -1.15
CDC43P18898 RIM8YGL045W 1629 nt7.88□□□□□ -1.15
CDC43P18898 WSC2YNL283C 1512 nt7.88□□□□□ -1.15
CDC43P18898 YGR259CYGR259C 441 nt7.86□□□□□ -1.15
CDC43P18898 SNF6YHL025W 999 nt7.86□□□□□ -1.15
CDC43P18898 IMP2'YIL154C 1041 nt7.85□□□□□ -1.15
CDC43P18898 CRR1YLR213C 1269 nt7.84□□□□□ -1.15
CDC43P18898 ADH2YMR303C 1047 nt7.84□□□□□ -1.15
CDC43P18898 RPC82YPR190C 1965 nt7.84□□□□□ -1.15
CDC43P18898 YEL009C-AYEL009C-A 408 nt7.83□□□□□ -1.16
CDC43P18898 TPO4YOR273C 1980 nt7.82□□□□□ -1.16
CDC43P18898 YIH1YCR059C 777 nt7.82□□□□□ -1.16
CDC43P18898 CWP1YKL096W 720 nt7.82□□□□□ -1.16
CDC43P18898 SOR2YDL246C 1074 nt7.81□□□□□ -1.16
CDC43P18898 SOR1YJR159W 1074 nt7.81□□□□□ -1.16
CDC43P18898 PAM17YKR065C 594 nt7.8□□□□□ -1.16
CDC43P18898 GPI16YHR188C 1833 nt7.79□□□□□ -1.16
CDC43P18898 YOR139CYOR139C 393 nt7.78□□□□□ -1.16
CDC43P18898 RAX1YOR301W 1308 nt7.78□□□□□ -1.16
CDC43P18898 SSN3YPL042C 1668 nt7.77□□□□□ -1.17
CDC43P18898 HEM12YDR047W 1089 nt7.76□□□□□ -1.17
CDC43P18898 RNQ1YCL028W 1218 nt7.76□□□□□ -1.17
CDC43P18898 GID7YCL039W 2238 nt7.75□□□□□ -1.17
CDC43P18898 ACO2YJL200C 2370 nt7.75□□□□□ -1.17
CDC43P18898 UGA4YDL210W 1716 nt7.75□□□□□ -1.17
CDC43P18898 YFL067WYFL067W 528 nt7.74□□□□□ -1.17
CDC43P18898 YLL053CYLL053C 459 nt7.74□□□□□ -1.17
CDC43P18898 MUP1YGR055W 1725 nt7.73□□□□□ -1.17
CDC43P18898 YCL074WYCL074W 927 nt7.73□□□□□ -1.17
CDC43P18898 YJR154WYJR154W 1041 nt7.73□□□□□ -1.17
CDC43P18898 MIC10YCL057C-A 294 nt7.73□□□□□ -1.17
CDC43P18898 YCL042WYCL042W 360 nt7.72□□□□□ -1.17
CDC43P18898 ATF2YGR177C 1608 nt7.71□□□□□ -1.17
CDC43P18898 AGP1YCL025C 1902 nt7.7□□□□□ -1.18
CDC43P18898 URA8YJR103W 1737 nt7.69□□□□□ -1.18
CDC43P18898 INA1YLR413W 2028 nt7.69□□□□□ -1.18
CDC43P18898 FMP45YDL222C 930 nt7.68□□□□□ -1.18
CDC43P18898 FTR1YER145C 1215 nt7.68□□□□□ -1.18
CDC43P18898 YDR433WYDR433W 441 nt7.67□□□□□ -1.18
CDC43P18898 ARA2YMR041C 1008 nt7.67□□□□□ -1.18
CDC43P18898 YLR122CYLR122C 378 nt7.66□□□□□ -1.18
CDC43P18898 ERV46YAL042W 1248 nt7.65□□□□□ -1.18
CDC43P18898 HOL1YNR055C 1761 nt7.65□□□□□ -1.18
CDC43P18898 YDL086C-AYDL086C-A 435 nt7.64□□□□□ -1.19
CDC43P18898 YKR040CYKR040C 504 nt7.64□□□□□ -1.19
CDC43P18898 DDR2YOL052C-A 186 nt7.64□□□□□ -1.19
CDC43P18898 MXR2YCL033C 507 nt7.64□□□□□ -1.19
CDC43P18898 FRD1YEL047C 1413 nt7.63□□□□□ -1.19
CDC43P18898 PUS2YGL063W 1113 nt7.63□□□□□ -1.19
CDC43P18898 ABZ2YMR289W 1125 nt7.63□□□□□ -1.19
CDC43P18898 GTB1YDR221W 2109 nt7.63□□□□□ -1.19
CDC43P18898 GAL1YBR020W 1587 nt7.63□□□□□ -1.19
CDC43P18898 RFC1YOR217W 2586 nt7.63□□□□□ -1.19
CDC43P18898 ANP1YEL036C 1503 nt7.62□□□□□ -1.19
CDC43P18898 LPX1YOR084W 1164 nt7.61□□□□□ -1.19
CDC43P18898 MIC12YBR262C 321 nt7.61□□□□□ -1.19
CDC43P18898 AQY1YPR192W 918 nt7.6□□□□□ -1.19
CDC43P18898 TRM5YHR070W 1500 nt7.6□□□□□ -1.19
CDC43P18898 LCP5YER127W 1074 nt7.58□□□□□ -1.2
CDC43P18898 YPR011CYPR011C 981 nt7.58□□□□□ -1.2
CDC43P18898 ESBP6YNL125C 2022 nt7.57□□□□□ -1.2
CDC43P18898 RDN18-1RDN18-1 1800 nt7.57□□□□□ -1.2
CDC43P18898 RDN18-2RDN18-2 1800 nt7.57□□□□□ -1.2
CDC43P18898 DUS1YML080W 1272 nt7.57□□□□□ -1.2
CDC43P18898 BNA2YJR078W 1362 nt7.57□□□□□ -1.2
CDC43P18898 DIC1YLR348C 897 nt7.55□□□□□ -1.2
CDC43P18898 SPC25YER018C 666 nt7.54□□□□□ -1.2
CDC43P18898 tM(CAU)CtM(CAU)C 72 nt7.53□□□□□ -1.2
CDC43P18898 IMT4tM(CAU)E 72 nt7.53□□□□□ -1.2
CDC43P18898 IMT3tM(CAU)J3 72 nt7.53□□□□□ -1.2
CDC43P18898 IMT1tM(CAU)O1 72 nt7.53□□□□□ -1.2
CDC43P18898 IMT2tM(CAU)P 72 nt7.53□□□□□ -1.2
CDC43P18898 BUR6YER159C 429 nt7.52□□□□□ -1.21
CDC43P18898 Q0010Q0010 387 nt7.52□□□□□ -1.21
CDC43P18898 FRE6YLL051C 2139 nt7.51□□□□□ -1.21
CDC43P18898 YHL008CYHL008C 1884 nt7.51□□□□□ -1.21
CDC43P18898 STB1YNL309W 1263 nt7.5□□□□□ -1.21
CDC43P18898 FEN2YCR028C 1539 nt7.5□□□□□ -1.21
CDC43P18898 GDH3YAL062W 1374 nt7.48□□□□□ -1.21
CDC43P18898 YJL118WYJL118W 660 nt7.48□□□□□ -1.21
CDC43P18898 HHO1YPL127C 777 nt7.48□□□□□ -1.21
CDC43P18898 ILV2YMR108W 2064 nt7.47□□□□□ -1.21
CDC43P18898 URH1YDR400W 1023 nt7.47□□□□□ -1.21
CDC43P18898 YDR524C-BYDR524C-B 201 nt7.47□□□□□ -1.21
CDC43P18898 STR3YGL184C 1398 nt7.46□□□□□ -1.21
CDC43P18898 XDJ1YLR090W 1380 nt7.46□□□□□ -1.21
CDC43P18898 YMR209CYMR209C 1374 nt7.46□□□□□ -1.21
CDC43P18898 YGR201CYGR201C 678 nt7.46□□□□□ -1.22
CDC43P18898 HIF1YLL022C 1158 nt7.46□□□□□ -1.22
CDC43P18898 PAB1YER165W 1734 nt7.45□□□□□ -1.22
CDC43P18898 YIR016WYIR016W 798 nt7.45□□□□□ -1.22
CDC43P18898 RTN2YDL204W 1182 nt7.42□□□□□ -1.22
CDC43P18898 TOM20YGR082W 552 nt7.42□□□□□ -1.22
CDC43P18898 THI72YOR192C 1800 nt7.41□□□□□ -1.22
Retrieved 100 of 7,029 protein–RNA pairs in 12.7 ms