Protein–RNA interactions for Protein: P0CX85

RPL35B, 60S ribosomal protein L35-B, yeastyeast

Known RBP Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPL35BP0CX85 YFL067WYFL067W 528 nt9.51□□□□□ -0.89
RPL35BP0CX85 GAL1YBR020W 1587 nt9.5□□□□□ -0.89
RPL35BP0CX85 UBX6YJL048C 1191 nt9.5□□□□□ -0.89
RPL35BP0CX85 WSC2YNL283C 1512 nt9.5□□□□□ -0.89
RPL35BP0CX85 RTF1YGL244W 1677 nt9.49□□□□□ -0.89
RPL35BP0CX85 SPC25YER018C 666 nt9.46□□□□□ -0.9
RPL35BP0CX85 CRR1YLR213C 1269 nt9.45□□□□□ -0.9
RPL35BP0CX85 DDR2YOL052C-A 186 nt9.45□□□□□ -0.9
RPL35BP0CX85 TRM5YHR070W 1500 nt9.45□□□□□ -0.9
RPL35BP0CX85 STB1YNL309W 1263 nt9.44□□□□□ -0.9
RPL35BP0CX85 YFR018CYFR018C 1092 nt9.43□□□□□ -0.9
RPL35BP0CX85 PIB2YGL023C 1908 nt9.43□□□□□ -0.9
RPL35BP0CX85 GPI16YHR188C 1833 nt9.42□□□□□ -0.9
RPL35BP0CX85 ATF2YGR177C 1608 nt9.42□□□□□ -0.9
RPL35BP0CX85 YDL086C-AYDL086C-A 435 nt9.41□□□□□ -0.9
RPL35BP0CX85 FRE6YLL051C 2139 nt9.39□□□□□ -0.91
RPL35BP0CX85 CCT4YDL143W 1587 nt9.38□□□□□ -0.91
RPL35BP0CX85 YDR524C-BYDR524C-B 201 nt9.38□□□□□ -0.91
RPL35BP0CX85 LYS4YDR234W 2082 nt9.38□□□□□ -0.91
RPL35BP0CX85 HEM12YDR047W 1089 nt9.36□□□□□ -0.91
RPL35BP0CX85 ANP1YEL036C 1503 nt9.36□□□□□ -0.91
RPL35BP0CX85 RRT5YFR032C 870 nt9.35□□□□□ -0.91
RPL35BP0CX85 YLR415CYLR415C 339 nt9.35□□□□□ -0.91
RPL35BP0CX85 BDH1YAL060W 1149 nt9.33□□□□□ -0.92
RPL35BP0CX85 FEN2YCR028C 1539 nt9.32□□□□□ -0.92
RPL35BP0CX85 SNG1YGR197C 1644 nt9.32□□□□□ -0.92
RPL35BP0CX85 SWC5YBR231C 912 nt9.32□□□□□ -0.92
RPL35BP0CX85 PTK1YKL198C 1989 nt9.3□□□□□ -0.92
RPL35BP0CX85 VPS60YDR486C 690 nt9.3□□□□□ -0.92
RPL35BP0CX85 PEX25YPL112C 1185 nt9.3□□□□□ -0.92
RPL35BP0CX85 YSP3YOR003W 1437 nt9.3□□□□□ -0.92
RPL35BP0CX85 YFL015W-AYFL015W-A 318 nt9.25□□□□□ -0.93
RPL35BP0CX85 YIR016WYIR016W 798 nt9.24□□□□□ -0.93
RPL35BP0CX85 MIC10YCL057C-A 294 nt9.24□□□□□ -0.93
RPL35BP0CX85 PAU16YKL224C 372 nt9.23□□□□□ -0.93
RPL35BP0CX85 ALG3YBL082C 1377 nt9.23□□□□□ -0.93
RPL35BP0CX85 YHR056W-AYHR056W-A 435 nt9.22□□□□□ -0.93
RPL35BP0CX85 YNL115CYNL115C 1935 nt9.22□□□□□ -0.93
RPL35BP0CX85 VPS75YNL246W 795 nt9.21□□□□□ -0.94
RPL35BP0CX85 SSN3YPL042C 1668 nt9.2□□□□□ -0.94
RPL35BP0CX85 SPT8YLR055C 1809 nt9.2□□□□□ -0.94
RPL35BP0CX85 BNA2YJR078W 1362 nt9.2□□□□□ -0.94
RPL35BP0CX85 PRE6YOL038W 765 nt9.19□□□□□ -0.94
RPL35BP0CX85 RAX1YOR301W 1308 nt9.19□□□□□ -0.94
RPL35BP0CX85 YFL066CYFL066C 1179 nt9.18□□□□□ -0.94
RPL35BP0CX85 MIC12YBR262C 321 nt9.17□□□□□ -0.94
RPL35BP0CX85 YFL054CYFL054C 1941 nt9.17□□□□□ -0.94
RPL35BP0CX85 MCH5YOR306C 1566 nt9.16□□□□□ -0.94
RPL35BP0CX85 TIM17YJL143W 477 nt9.15□□□□□ -0.94
RPL35BP0CX85 YGR201CYGR201C 678 nt9.11□□□□□ -0.95
RPL35BP0CX85 NAT4YMR069W 858 nt9.1□□□□□ -0.95
RPL35BP0CX85 GLK1YCL040W 1503 nt9.09□□□□□ -0.95
RPL35BP0CX85 HHO1YPL127C 777 nt9.07□□□□□ -0.96
RPL35BP0CX85 XDJ1YLR090W 1380 nt9.07□□□□□ -0.96
RPL35BP0CX85 SHM2YLR058C 1410 nt9.05□□□□□ -0.96
RPL35BP0CX85 MIR1YJR077C 936 nt9.04□□□□□ -0.96
RPL35BP0CX85 PAU7YAR020C 168 nt9.02□□□□□ -0.97
RPL35BP0CX85 GDH3YAL062W 1374 nt9.01□□□□□ -0.97
RPL35BP0CX85 THI74YDR438W 1113 nt9.01□□□□□ -0.97
RPL35BP0CX85 BSP1YPR171W 1731 nt9□□□□□ -0.97
RPL35BP0CX85 MSF1YPR047W 1410 nt9□□□□□ -0.97
RPL35BP0CX85 GID7YCL039W 2238 nt8.99□□□□□ -0.97
RPL35BP0CX85 SWE1YJL187C 2460 nt8.97□□□□□ -0.97
RPL35BP0CX85 NIT1YIL164C 600 nt8.96□□□□□ -0.98
RPL35BP0CX85 DAT1YML113W 747 nt8.95□□□□□ -0.98
RPL35BP0CX85 GOR1YNL274C 1053 nt8.95□□□□□ -0.98
RPL35BP0CX85 SGT2YOR007C 1041 nt8.93□□□□□ -0.98
RPL35BP0CX85 AVT6YER119C 1347 nt8.93□□□□□ -0.98
RPL35BP0CX85 CCA1YER168C 1641 nt8.93□□□□□ -0.98
RPL35BP0CX85 BOR1YNL275W 1731 nt8.93□□□□□ -0.98
RPL35BP0CX85 UBA4YHR111W 1323 nt8.91□□□□□ -0.98
RPL35BP0CX85 SHB17YKR043C 816 nt8.89□□□□□ -0.99
RPL35BP0CX85 YCR102CYCR102C 1107 nt8.88□□□□□ -0.99
RPL35BP0CX85 YCR087WYCR087W 516 nt8.87□□□□□ -0.99
RPL35BP0CX85 YDR010CYDR010C 333 nt8.86□□□□□ -0.99
RPL35BP0CX85 RET2YFR051C 1641 nt8.86□□□□□ -0.99
RPL35BP0CX85 AGP1YCL025C 1902 nt8.86□□□□□ -0.99
RPL35BP0CX85 YSR3YKR053C 1215 nt8.85□□□□□ -0.99
RPL35BP0CX85 YGL034CYGL034C 366 nt8.84□□□□□ -0.99
RPL35BP0CX85 SBA1YKL117W 651 nt8.84□□□□□ -0.99
RPL35BP0CX85 ESBP6YNL125C 2022 nt8.83□□□□□ -1
RPL35BP0CX85 PHO89YBR296C 1725 nt8.77□□□□□ -1
RPL35BP0CX85 NPP1YCR026C 2229 nt8.77□□□□□ -1.01
RPL35BP0CX85 YCL074WYCL074W 927 nt8.77□□□□□ -1.01
RPL35BP0CX85 DUS1YML080W 1272 nt8.77□□□□□ -1.01
RPL35BP0CX85 NBP35YGL091C 987 nt8.75□□□□□ -1.01
RPL35BP0CX85 DUT1YBR252W 444 nt8.75□□□□□ -1.01
RPL35BP0CX85 MRP20YDR405W 792 nt8.74□□□□□ -1.01
RPL35BP0CX85 TIR3YIL011W 810 nt8.74□□□□□ -1.01
RPL35BP0CX85 XYL2YLR070C 1071 nt8.74□□□□□ -1.01
RPL35BP0CX85 AIM45YPR004C 1035 nt8.74□□□□□ -1.01
RPL35BP0CX85 RFC1YOR217W 2586 nt8.74□□□□□ -1.01
RPL35BP0CX85 STR3YGL184C 1398 nt8.73□□□□□ -1.01
RPL35BP0CX85 YAT1YAR035W 2064 nt8.71□□□□□ -1.01
RPL35BP0CX85 LSC2YGR244C 1284 nt8.71□□□□□ -1.02
RPL35BP0CX85 GLR1YPL091W 1452 nt8.7□□□□□ -1.02
RPL35BP0CX85 RDN25-1RDN25-1 3396 nt8.7□□□□□ -1.02
RPL35BP0CX85 RDN25-2RDN25-2 3396 nt8.7□□□□□ -1.02
RPL35BP0CX85 NDI1YML120C 1542 nt8.7□□□□□ -1.02
RPL35BP0CX85 SFP1YLR403W 2052 nt8.69□□□□□ -1.02
Retrieved 100 of 7,029 protein–RNA pairs in 12.8 ms