Protein–RNA interactions for Protein: P04147

PAB1, Polyadenylate-binding protein, cytoplasmic and nuclear, yeastyeast

Known RBP RIP-Chip data

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PAB1P04147 ATF2YGR177C 1608 nt11.35□□□□□ -0.59
PAB1P04147 ERF2YLR246W 1080 nt11.35□□□□□ -0.59
PAB1P04147 TAD3YLR316C 969 nt11.35□□□□□ -0.59
PAB1P04147 LYS4YDR234W 2082 nt11.34□□□□□ -0.59
PAB1P04147 CRR1YLR213C 1269 nt11.33□□□□□ -0.6
PAB1P04147 YFL054CYFL054C 1941 nt11.31□□□□□ -0.6
PAB1P04147 SPC25YER018C 666 nt11.28□□□□□ -0.6 RIP-Chip
PAB1P04147 YFL067WYFL067W 528 nt11.28□□□□□ -0.6
PAB1P04147 STB1YNL309W 1263 nt11.27□□□□□ -0.61
PAB1P04147 DDR2YOL052C-A 186 nt11.25□□□□□ -0.61
PAB1P04147 YFR018CYFR018C 1092 nt11.24□□□□□ -0.61
PAB1P04147 YDL086C-AYDL086C-A 435 nt11.22□□□□□ -0.61
PAB1P04147 YDR524C-BYDR524C-B 201 nt11.22□□□□□ -0.61 RIP-Chip
PAB1P04147 CCT4YDL143W 1587 nt11.21□□□□□ -0.61
PAB1P04147 ANP1YEL036C 1503 nt11.21□□□□□ -0.61
PAB1P04147 BDH1YAL060W 1149 nt11.21□□□□□ -0.61 RIP-Chip
PAB1P04147 SNG1YGR197C 1644 nt11.2□□□□□ -0.62 RIP-Chip
PAB1P04147 MIC10YCL057C-A 294 nt11.2□□□□□ -0.62 RIP-Chip
PAB1P04147 GPI16YHR188C 1833 nt11.19□□□□□ -0.62
PAB1P04147 SPT8YLR055C 1809 nt11.19□□□□□ -0.62
PAB1P04147 HEM12YDR047W 1089 nt11.18□□□□□ -0.62
PAB1P04147 VPS60YDR486C 690 nt11.17□□□□□ -0.62
PAB1P04147 YSP3YOR003W 1437 nt11.16□□□□□ -0.62
PAB1P04147 PRE6YOL038W 765 nt11.15□□□□□ -0.62 RIP-Chip
PAB1P04147 FEN2YCR028C 1539 nt11.14□□□□□ -0.63
PAB1P04147 ALG3YBL082C 1377 nt11.14□□□□□ -0.63
PAB1P04147 YFL015W-AYFL015W-A 318 nt11.13□□□□□ -0.63
PAB1P04147 YLR415CYLR415C 339 nt11.11□□□□□ -0.63
PAB1P04147 PEX25YPL112C 1185 nt11.11□□□□□ -0.63
PAB1P04147 SWC5YBR231C 912 nt11.1□□□□□ -0.63
PAB1P04147 YFL066CYFL066C 1179 nt11.09□□□□□ -0.63
PAB1P04147 PAU16YKL224C 372 nt11.09□□□□□ -0.63 RIP-Chip
PAB1P04147 YHR056W-AYHR056W-A 435 nt11.06□□□□□ -0.64
PAB1P04147 YNL115CYNL115C 1935 nt11.05□□□□□ -0.64
PAB1P04147 RRT5YFR032C 870 nt11.05□□□□□ -0.64
PAB1P04147 YIR016WYIR016W 798 nt11.05□□□□□ -0.64 RIP-Chip
PAB1P04147 RDN37-1RDN37-1 5354 nt11.03□□□□□ -0.64
PAB1P04147 RDN37-2RDN37-2 5354 nt11.03□□□□□ -0.64
PAB1P04147 SWE1YJL187C 2460 nt11.02□□□□□ -0.65
PAB1P04147 MIC12YBR262C 321 nt10.98□□□□□ -0.65 RIP-Chip
PAB1P04147 RAX1YOR301W 1308 nt10.94□□□□□ -0.66
PAB1P04147 BOR1YNL275W 1731 nt10.93□□□□□ -0.66
PAB1P04147 VPS75YNL246W 795 nt10.92□□□□□ -0.66 RIP-Chip
PAB1P04147 BNA2YJR078W 1362 nt10.91□□□□□ -0.66
PAB1P04147 XDJ1YLR090W 1380 nt10.86□□□□□ -0.67
PAB1P04147 SHM2YLR058C 1410 nt10.85□□□□□ -0.67
PAB1P04147 TIM17YJL143W 477 nt10.85□□□□□ -0.67 RIP-Chip
PAB1P04147 MIR1YJR077C 936 nt10.84□□□□□ -0.67
PAB1P04147 YGR201CYGR201C 678 nt10.81□□□□□ -0.68
PAB1P04147 HHO1YPL127C 777 nt10.8□□□□□ -0.68
PAB1P04147 NIT1YIL164C 600 nt10.79□□□□□ -0.68
PAB1P04147 CCA1YER168C 1641 nt10.79□□□□□ -0.68
PAB1P04147 HSP60YLR259C 1719 nt10.78□□□□□ -0.68
PAB1P04147 UME6YDR207C 2511 nt10.78□□□□□ -0.68
PAB1P04147 GDH3YAL062W 1374 nt10.77□□□□□ -0.68
PAB1P04147 Q0182Q0182 405 nt10.77□□□□□ -0.69
PAB1P04147 NAT4YMR069W 858 nt10.77□□□□□ -0.69
PAB1P04147 AGP1YCL025C 1902 nt10.76□□□□□ -0.69
PAB1P04147 GLK1YCL040W 1503 nt10.75□□□□□ -0.69
PAB1P04147 THI74YDR438W 1113 nt10.74□□□□□ -0.69
PAB1P04147 SGT2YOR007C 1041 nt10.74□□□□□ -0.69
PAB1P04147 MSF1YPR047W 1410 nt10.73□□□□□ -0.69
PAB1P04147 FUR4YBR021W 1902 nt10.72□□□□□ -0.69
PAB1P04147 SBA1YKL117W 651 nt10.69□□□□□ -0.7 RIP-Chip
PAB1P04147 AVT6YER119C 1347 nt10.68□□□□□ -0.7
PAB1P04147 PAU7YAR020C 168 nt10.68□□□□□ -0.7
PAB1P04147 DUT1YBR252W 444 nt10.67□□□□□ -0.7 RIP-Chip
PAB1P04147 YDR010CYDR010C 333 nt10.66□□□□□ -0.7
PAB1P04147 SHB17YKR043C 816 nt10.66□□□□□ -0.7
PAB1P04147 DAT1YML113W 747 nt10.66□□□□□ -0.7
PAB1P04147 UBA4YHR111W 1323 nt10.64□□□□□ -0.71
PAB1P04147 GOR1YNL274C 1053 nt10.61□□□□□ -0.71
PAB1P04147 PRP4YPR178W 1398 nt10.56□□□□□ -0.72
PAB1P04147 RET2YFR051C 1641 nt10.56□□□□□ -0.72
PAB1P04147 YGL034CYGL034C 366 nt10.56□□□□□ -0.72
PAB1P04147 DUS1YML080W 1272 nt10.56□□□□□ -0.72
PAB1P04147 YCR102CYCR102C 1107 nt10.54□□□□□ -0.72
PAB1P04147 YSR3YKR053C 1215 nt10.54□□□□□ -0.72 RIP-Chip
PAB1P04147 YCL074WYCL074W 927 nt10.51□□□□□ -0.73
PAB1P04147 BMT6YLR063W 1098 nt10.5□□□□□ -0.73
PAB1P04147 STR3YGL184C 1398 nt10.5□□□□□ -0.73
PAB1P04147 RDN18-1RDN18-1 1800 nt10.49□□□□□ -0.73
PAB1P04147 RDN18-2RDN18-2 1800 nt10.49□□□□□ -0.73
PAB1P04147 NBP35YGL091C 987 nt10.49□□□□□ -0.73
PAB1P04147 XYL2YLR070C 1071 nt10.49□□□□□ -0.73
PAB1P04147 PHO89YBR296C 1725 nt10.49□□□□□ -0.73
PAB1P04147 DPS1YLL018C 1674 nt10.48□□□□□ -0.73
PAB1P04147 ALG12YNR030W 1656 nt10.48□□□□□ -0.73 RIP-Chip
PAB1P04147 AAC1YMR056C 930 nt10.48□□□□□ -0.73 RIP-Chip
PAB1P04147 YKR005CYKR005C 1578 nt10.47□□□□□ -0.73
PAB1P04147 SFA1YDL168W 1161 nt10.46□□□□□ -0.73
PAB1P04147 YCR087WYCR087W 516 nt10.43□□□□□ -0.74
PAB1P04147 SHH4YLR164W 507 nt10.42□□□□□ -0.74
PAB1P04147 COQ2YNR041C 1119 nt10.41□□□□□ -0.74
PAB1P04147 AIM45YPR004C 1035 nt10.41□□□□□ -0.74 RIP-Chip
PAB1P04147 YGR259CYGR259C 441 nt10.4□□□□□ -0.74
PAB1P04147 AQY2YLL052C 450 nt10.4□□□□□ -0.74
PAB1P04147 TIR3YIL011W 810 nt10.39□□□□□ -0.75
PAB1P04147 YHL019W-AYHL019W-A 594 nt10.38□□□□□ -0.75
PAB1P04147 RBG1YAL036C 1110 nt10.38□□□□□ -0.75
Retrieved 100 of 7,029 protein–RNA pairs in 11.6 ms