Protein–RNA interactions for Protein: Q8IWY4

SCUBE1, Signal peptide, CUB and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE1Q8IWY4 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC22.15■■□□□ 1.14
SCUBE1Q8IWY4 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC22.15■■□□□ 1.14
SCUBE1Q8IWY4 DUSP8P3-201ENST00000399571 1760 ntBASIC22.15■■□□□ 1.14
SCUBE1Q8IWY4 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC22.14■■□□□ 1.14
SCUBE1Q8IWY4 ECEL1P1-201ENST00000373592 1742 ntBASIC22.14■■□□□ 1.14
SCUBE1Q8IWY4 AC007375.3-201ENST00000600936 2314 ntBASIC22.14■■□□□ 1.14
SCUBE1Q8IWY4 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
SCUBE1Q8IWY4 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC22.14■■□□□ 1.13
SCUBE1Q8IWY4 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC22.14■■□□□ 1.13
SCUBE1Q8IWY4 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
SCUBE1Q8IWY4 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC22.14■■□□□ 1.13
SCUBE1Q8IWY4 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC22.14■■□□□ 1.13
SCUBE1Q8IWY4 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC22.14■■□□□ 1.13
SCUBE1Q8IWY4 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC22.14■■□□□ 1.13
SCUBE1Q8IWY4 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
SCUBE1Q8IWY4 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
SCUBE1Q8IWY4 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC22.14■■□□□ 1.13
SCUBE1Q8IWY4 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC22.13■■□□□ 1.13
SCUBE1Q8IWY4 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
SCUBE1Q8IWY4 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
SCUBE1Q8IWY4 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC22.13■■□□□ 1.13
SCUBE1Q8IWY4 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC22.13■■□□□ 1.13
SCUBE1Q8IWY4 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC22.13■■□□□ 1.13
SCUBE1Q8IWY4 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
SCUBE1Q8IWY4 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
SCUBE1Q8IWY4 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC22.13■■□□□ 1.13
SCUBE1Q8IWY4 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
SCUBE1Q8IWY4 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC22.13■■□□□ 1.13
SCUBE1Q8IWY4 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC22.12■■□□□ 1.13
SCUBE1Q8IWY4 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC22.12■■□□□ 1.13
SCUBE1Q8IWY4 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
SCUBE1Q8IWY4 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC22.12■■□□□ 1.13
SCUBE1Q8IWY4 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
SCUBE1Q8IWY4 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC22.12■■□□□ 1.13
SCUBE1Q8IWY4 AC103724.3-201ENST00000564481 992 ntBASIC22.12■■□□□ 1.13
SCUBE1Q8IWY4 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
SCUBE1Q8IWY4 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
SCUBE1Q8IWY4 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
SCUBE1Q8IWY4 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
SCUBE1Q8IWY4 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
SCUBE1Q8IWY4 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
SCUBE1Q8IWY4 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
SCUBE1Q8IWY4 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC22.11■■□□□ 1.13
SCUBE1Q8IWY4 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
SCUBE1Q8IWY4 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC22.11■■□□□ 1.13
SCUBE1Q8IWY4 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC22.11■■□□□ 1.13
SCUBE1Q8IWY4 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
SCUBE1Q8IWY4 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
SCUBE1Q8IWY4 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC22.1■■□□□ 1.13
SCUBE1Q8IWY4 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
SCUBE1Q8IWY4 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
SCUBE1Q8IWY4 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
SCUBE1Q8IWY4 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
SCUBE1Q8IWY4 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC22.1■■□□□ 1.13
SCUBE1Q8IWY4 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
SCUBE1Q8IWY4 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC22.1■■□□□ 1.13
SCUBE1Q8IWY4 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
SCUBE1Q8IWY4 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
SCUBE1Q8IWY4 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
SCUBE1Q8IWY4 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
SCUBE1Q8IWY4 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC22.09■■□□□ 1.13
SCUBE1Q8IWY4 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
SCUBE1Q8IWY4 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
SCUBE1Q8IWY4 AC092068.2-201ENST00000590491 1708 ntBASIC22.09■■□□□ 1.13
SCUBE1Q8IWY4 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC22.08■■□□□ 1.13
SCUBE1Q8IWY4 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
SCUBE1Q8IWY4 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
SCUBE1Q8IWY4 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
SCUBE1Q8IWY4 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
SCUBE1Q8IWY4 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC22.08■■□□□ 1.13
SCUBE1Q8IWY4 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
SCUBE1Q8IWY4 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC22.08■■□□□ 1.12
SCUBE1Q8IWY4 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC22.07■■□□□ 1.12
SCUBE1Q8IWY4 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC22.07■■□□□ 1.12
SCUBE1Q8IWY4 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
SCUBE1Q8IWY4 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC22.07■■□□□ 1.12
SCUBE1Q8IWY4 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
SCUBE1Q8IWY4 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC22.07■■□□□ 1.12
SCUBE1Q8IWY4 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
SCUBE1Q8IWY4 KRT18P24-201ENST00000344739 1156 ntBASIC22.07■■□□□ 1.12
SCUBE1Q8IWY4 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
SCUBE1Q8IWY4 SSSCA1-AS1-201ENST00000567594 614 ntBASIC22.07■■□□□ 1.12
SCUBE1Q8IWY4 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
SCUBE1Q8IWY4 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
SCUBE1Q8IWY4 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
SCUBE1Q8IWY4 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
SCUBE1Q8IWY4 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
SCUBE1Q8IWY4 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
SCUBE1Q8IWY4 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC22.06■■□□□ 1.12
SCUBE1Q8IWY4 AC120024.1-201ENST00000562672 995 ntBASIC22.06■■□□□ 1.12
SCUBE1Q8IWY4 AL031848.2-201ENST00000607670 837 ntBASIC22.06■■□□□ 1.12
SCUBE1Q8IWY4 AC011551.1-201ENST00000614101 683 ntBASIC22.06■■□□□ 1.12
SCUBE1Q8IWY4 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
SCUBE1Q8IWY4 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
SCUBE1Q8IWY4 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
SCUBE1Q8IWY4 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
SCUBE1Q8IWY4 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC22.06■■□□□ 1.12
SCUBE1Q8IWY4 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC22.06■■□□□ 1.12
SCUBE1Q8IWY4 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC22.05■■□□□ 1.12
SCUBE1Q8IWY4 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms