Protein–RNA interactions for Protein: Q86VV8

RTTN, Rotatin, humanhuman

Predictions only

Length 2,226 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTTNQ86VV8 STK32C-205ENST00000456004 607 ntTSL 2 BASIC19.77■□□□□ 0.76
RTTNQ86VV8 SRR-208ENST00000576848 588 ntTSL 4 BASIC19.77■□□□□ 0.76
RTTNQ86VV8 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC19.77■□□□□ 0.76
RTTNQ86VV8 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
RTTNQ86VV8 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
RTTNQ86VV8 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RTTNQ86VV8 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
RTTNQ86VV8 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
RTTNQ86VV8 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
RTTNQ86VV8 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RTTNQ86VV8 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
RTTNQ86VV8 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC19.76■□□□□ 0.75
RTTNQ86VV8 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC19.76■□□□□ 0.75
RTTNQ86VV8 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RTTNQ86VV8 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC19.76■□□□□ 0.75
RTTNQ86VV8 TRIR-202ENST00000588213 841 ntTSL 3 BASIC19.76■□□□□ 0.75
RTTNQ86VV8 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RTTNQ86VV8 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC19.76■□□□□ 0.75
RTTNQ86VV8 AC005703.6-201ENST00000623265 1329 ntBASIC19.76■□□□□ 0.75
RTTNQ86VV8 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
RTTNQ86VV8 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
RTTNQ86VV8 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
RTTNQ86VV8 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RTTNQ86VV8 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC19.75■□□□□ 0.75
RTTNQ86VV8 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC19.75■□□□□ 0.75
RTTNQ86VV8 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC19.75■□□□□ 0.75
RTTNQ86VV8 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RTTNQ86VV8 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
RTTNQ86VV8 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
RTTNQ86VV8 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC19.75■□□□□ 0.75
RTTNQ86VV8 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RTTNQ86VV8 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
RTTNQ86VV8 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RTTNQ86VV8 MIR3621-201ENST00000580529 85 ntBASIC19.75■□□□□ 0.75
RTTNQ86VV8 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC19.75■□□□□ 0.75
RTTNQ86VV8 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC19.74■□□□□ 0.75
RTTNQ86VV8 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RTTNQ86VV8 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RTTNQ86VV8 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC19.74■□□□□ 0.75
RTTNQ86VV8 ALDH1A3-203ENST00000557963 1670 ntBASIC19.74■□□□□ 0.75
RTTNQ86VV8 EXOG-217ENST00000630638 197 ntTSL 5 BASIC19.74■□□□□ 0.75
RTTNQ86VV8 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RTTNQ86VV8 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
RTTNQ86VV8 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC19.73■□□□□ 0.75
RTTNQ86VV8 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
RTTNQ86VV8 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
RTTNQ86VV8 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RTTNQ86VV8 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC19.73■□□□□ 0.75
RTTNQ86VV8 QDPR-206ENST00000508623 601 ntTSL 3 BASIC19.73■□□□□ 0.75
RTTNQ86VV8 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC19.73■□□□□ 0.75
RTTNQ86VV8 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC19.73■□□□□ 0.75
RTTNQ86VV8 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RTTNQ86VV8 MIR5787-201ENST00000611784 55 ntBASIC19.73■□□□□ 0.75
RTTNQ86VV8 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
RTTNQ86VV8 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
RTTNQ86VV8 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
RTTNQ86VV8 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
RTTNQ86VV8 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RTTNQ86VV8 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RTTNQ86VV8 TERT-206ENST00000508104 2486 ntTSL 5 BASIC19.73■□□□□ 0.75
RTTNQ86VV8 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC19.73■□□□□ 0.75
RTTNQ86VV8 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
RTTNQ86VV8 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RTTNQ86VV8 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
RTTNQ86VV8 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RTTNQ86VV8 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
RTTNQ86VV8 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
RTTNQ86VV8 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RTTNQ86VV8 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RTTNQ86VV8 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC19.72■□□□□ 0.75
RTTNQ86VV8 EBPL-204ENST00000378272 766 ntTSL 3 BASIC19.72■□□□□ 0.75
RTTNQ86VV8 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC19.72■□□□□ 0.75
RTTNQ86VV8 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
RTTNQ86VV8 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RTTNQ86VV8 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RTTNQ86VV8 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RTTNQ86VV8 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
RTTNQ86VV8 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC19.71■□□□□ 0.75
RTTNQ86VV8 AL136116.3-201ENST00000402907 1138 ntBASIC19.71■□□□□ 0.75
RTTNQ86VV8 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC19.71■□□□□ 0.75
RTTNQ86VV8 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC19.71■□□□□ 0.75
RTTNQ86VV8 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC19.71■□□□□ 0.75
RTTNQ86VV8 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RTTNQ86VV8 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
RTTNQ86VV8 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
RTTNQ86VV8 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RTTNQ86VV8 AL161729.1-201ENST00000604104 1402 ntBASIC19.71■□□□□ 0.75
RTTNQ86VV8 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RTTNQ86VV8 GUK1-205ENST00000366722 850 ntTSL 3 BASIC19.71■□□□□ 0.75
RTTNQ86VV8 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
RTTNQ86VV8 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RTTNQ86VV8 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
RTTNQ86VV8 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RTTNQ86VV8 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
RTTNQ86VV8 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RTTNQ86VV8 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC19.7■□□□□ 0.74
RTTNQ86VV8 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC19.7■□□□□ 0.74
RTTNQ86VV8 AC010997.5-201ENST00000609182 354 ntBASIC19.7■□□□□ 0.74
RTTNQ86VV8 MIR6722-201ENST00000617286 78 ntBASIC19.7■□□□□ 0.74
RTTNQ86VV8 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 84.3 ms