Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
SLC6A12P48065 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC21.81■■□□□ 1.08
SLC6A12P48065 AC012676.1-201ENST00000574705 1949 ntBASIC21.8■■□□□ 1.08
SLC6A12P48065 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SLC6A12P48065 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC21.8■■□□□ 1.08
SLC6A12P48065 CD72-202ENST00000378430 585 ntTSL 3 BASIC21.8■■□□□ 1.08
SLC6A12P48065 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC21.8■■□□□ 1.08
SLC6A12P48065 OR2A1-AS1-204ENST00000470435 602 ntBASIC21.8■■□□□ 1.08
SLC6A12P48065 CREM-229ENST00000474362 1030 ntTSL 2 BASIC21.8■■□□□ 1.08
SLC6A12P48065 AC010997.5-201ENST00000609182 354 ntBASIC21.8■■□□□ 1.08
SLC6A12P48065 EXOG-217ENST00000630638 197 ntTSL 5 BASIC21.8■■□□□ 1.08
SLC6A12P48065 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC21.8■■□□□ 1.08
SLC6A12P48065 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SLC6A12P48065 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SLC6A12P48065 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
SLC6A12P48065 AC133561.1-201ENST00000568600 2415 ntBASIC21.79■■□□□ 1.08
SLC6A12P48065 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC21.79■■□□□ 1.08
SLC6A12P48065 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SLC6A12P48065 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SLC6A12P48065 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SLC6A12P48065 TSPY9P-201ENST00000440215 945 ntBASIC21.79■■□□□ 1.08
SLC6A12P48065 TSPY11P-201ENST00000442607 1045 ntBASIC21.79■■□□□ 1.08
SLC6A12P48065 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC21.79■■□□□ 1.08
SLC6A12P48065 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
SLC6A12P48065 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SLC6A12P48065 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC21.79■■□□□ 1.08
SLC6A12P48065 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC21.79■■□□□ 1.08
SLC6A12P48065 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC21.79■■□□□ 1.08
SLC6A12P48065 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SLC6A12P48065 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC21.78■■□□□ 1.08
SLC6A12P48065 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SLC6A12P48065 LSM4-201ENST00000252816 986 ntTSL 2 BASIC21.78■■□□□ 1.08
SLC6A12P48065 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SLC6A12P48065 HES6-204ENST00000409182 863 ntTSL 2 BASIC21.78■■□□□ 1.08
SLC6A12P48065 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC21.78■■□□□ 1.08
SLC6A12P48065 UNC93B8-201ENST00000511903 705 ntBASIC21.78■■□□□ 1.08
SLC6A12P48065 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC21.78■■□□□ 1.08
SLC6A12P48065 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SLC6A12P48065 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SLC6A12P48065 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC21.77■■□□□ 1.08
SLC6A12P48065 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SLC6A12P48065 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC21.77■■□□□ 1.08
SLC6A12P48065 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SLC6A12P48065 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SLC6A12P48065 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC21.77■■□□□ 1.08
SLC6A12P48065 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC21.77■■□□□ 1.08
SLC6A12P48065 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
SLC6A12P48065 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SLC6A12P48065 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SLC6A12P48065 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC21.76■■□□□ 1.07
SLC6A12P48065 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SLC6A12P48065 TFPT-201ENST00000391757 774 ntTSL 5 BASIC21.76■■□□□ 1.07
SLC6A12P48065 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
SLC6A12P48065 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC21.76■■□□□ 1.07
SLC6A12P48065 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
SLC6A12P48065 AC144652.1-201ENST00000609974 1624 ntBASIC21.76■■□□□ 1.07
SLC6A12P48065 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
SLC6A12P48065 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SLC6A12P48065 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC21.75■■□□□ 1.07
SLC6A12P48065 AL353803.4-201ENST00000565882 1934 ntBASIC21.75■■□□□ 1.07
SLC6A12P48065 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC21.75■■□□□ 1.07
SLC6A12P48065 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SLC6A12P48065 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
SLC6A12P48065 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
SLC6A12P48065 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SLC6A12P48065 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC21.74■■□□□ 1.07
SLC6A12P48065 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SLC6A12P48065 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SLC6A12P48065 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC21.74■■□□□ 1.07
SLC6A12P48065 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SLC6A12P48065 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC21.74■■□□□ 1.07
SLC6A12P48065 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
SLC6A12P48065 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
SLC6A12P48065 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SLC6A12P48065 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SLC6A12P48065 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
SLC6A12P48065 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC21.73■■□□□ 1.07
SLC6A12P48065 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SLC6A12P48065 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SLC6A12P48065 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC21.72■■□□□ 1.07
SLC6A12P48065 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SLC6A12P48065 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
SLC6A12P48065 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SLC6A12P48065 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC21.72■■□□□ 1.07
SLC6A12P48065 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SLC6A12P48065 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC21.72■■□□□ 1.07
SLC6A12P48065 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SLC6A12P48065 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SLC6A12P48065 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
SLC6A12P48065 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SLC6A12P48065 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SLC6A12P48065 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
SLC6A12P48065 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC21.71■■□□□ 1.07
SLC6A12P48065 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SLC6A12P48065 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SLC6A12P48065 GUSBP5-201ENST00000418136 578 ntBASIC21.71■■□□□ 1.07
SLC6A12P48065 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC21.71■■□□□ 1.07
SLC6A12P48065 MIR6724-1-201ENST00000616420 92 ntBASIC21.71■■□□□ 1.07
SLC6A12P48065 MIR6724-2-201ENST00000616483 92 ntBASIC21.71■■□□□ 1.07
SLC6A12P48065 MIR6724-4-201ENST00000617390 92 ntBASIC21.71■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms