Protein–RNA interactions for Protein: P04155

TFF1, Trefoil factor 1, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TFF1P04155 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
TFF1P04155 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
TFF1P04155 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TFF1P04155 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TFF1P04155 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
TFF1P04155 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
TFF1P04155 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC18.9■□□□□ 0.62
TFF1P04155 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC18.9■□□□□ 0.62
TFF1P04155 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC18.9■□□□□ 0.62
TFF1P04155 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC18.9■□□□□ 0.62
TFF1P04155 MIR6724-1-201ENST00000616420 92 ntBASIC18.9■□□□□ 0.62
TFF1P04155 MIR6724-2-201ENST00000616483 92 ntBASIC18.9■□□□□ 0.62
TFF1P04155 MIR6724-4-201ENST00000617390 92 ntBASIC18.9■□□□□ 0.62
TFF1P04155 MIR6724-3-201ENST00000622482 92 ntBASIC18.9■□□□□ 0.62
TFF1P04155 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
TFF1P04155 AC079630.1-202ENST00000618127 1840 ntBASIC18.9■□□□□ 0.62
TFF1P04155 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TFF1P04155 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
TFF1P04155 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TFF1P04155 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
TFF1P04155 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TFF1P04155 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
TFF1P04155 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
TFF1P04155 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC18.89■□□□□ 0.62
TFF1P04155 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
TFF1P04155 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
TFF1P04155 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TFF1P04155 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
TFF1P04155 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
TFF1P04155 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
TFF1P04155 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
TFF1P04155 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC18.89■□□□□ 0.61
TFF1P04155 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TFF1P04155 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TFF1P04155 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TFF1P04155 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TFF1P04155 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TFF1P04155 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TFF1P04155 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TFF1P04155 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TFF1P04155 AK3-203ENST00000447596 705 ntTSL 2 BASIC18.88■□□□□ 0.61
TFF1P04155 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC18.88■□□□□ 0.61
TFF1P04155 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC18.88■□□□□ 0.61
TFF1P04155 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
TFF1P04155 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TFF1P04155 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TFF1P04155 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
TFF1P04155 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
TFF1P04155 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TFF1P04155 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC18.87■□□□□ 0.61
TFF1P04155 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TFF1P04155 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TFF1P04155 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TFF1P04155 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
TFF1P04155 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC18.87■□□□□ 0.61
TFF1P04155 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC18.87■□□□□ 0.61
TFF1P04155 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TFF1P04155 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TFF1P04155 DUSP8P5-201ENST00000422884 1815 ntBASIC18.87■□□□□ 0.61
TFF1P04155 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TFF1P04155 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC18.87■□□□□ 0.61
TFF1P04155 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TFF1P04155 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TFF1P04155 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TFF1P04155 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TFF1P04155 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TFF1P04155 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TFF1P04155 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC18.86■□□□□ 0.61
TFF1P04155 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TFF1P04155 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC18.86■□□□□ 0.61
TFF1P04155 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC18.86■□□□□ 0.61
TFF1P04155 AL117332.1-201ENST00000622628 974 ntBASIC18.86■□□□□ 0.61
TFF1P04155 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TFF1P04155 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TFF1P04155 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TFF1P04155 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TFF1P04155 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
TFF1P04155 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TFF1P04155 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TFF1P04155 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TFF1P04155 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
TFF1P04155 RASSF1-AS1-201ENST00000629828 790 ntBASIC18.85■□□□□ 0.61
TFF1P04155 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TFF1P04155 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TFF1P04155 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC18.85■□□□□ 0.61
TFF1P04155 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC18.85■□□□□ 0.61
TFF1P04155 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TFF1P04155 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TFF1P04155 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC18.84■□□□□ 0.61
TFF1P04155 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC18.84■□□□□ 0.61
TFF1P04155 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC18.84■□□□□ 0.61
TFF1P04155 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
TFF1P04155 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TFF1P04155 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC18.84■□□□□ 0.61
TFF1P04155 AC009102.2-201ENST00000606772 1639 ntBASIC18.84■□□□□ 0.61
TFF1P04155 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
TFF1P04155 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC18.84■□□□□ 0.61
TFF1P04155 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC18.84■□□□□ 0.61
TFF1P04155 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
TFF1P04155 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms