Protein–RNA interactions for Protein: A6NKU9

SPDYE3, Speedy protein E3, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDYE3A6NKU9 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
SPDYE3A6NKU9 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC25.67■■□□□ 1.7
SPDYE3A6NKU9 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
SPDYE3A6NKU9 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC25.67■■□□□ 1.7
SPDYE3A6NKU9 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC25.67■■□□□ 1.7
SPDYE3A6NKU9 PBX2P1-201ENST00000493219 1291 ntBASIC25.67■■□□□ 1.7
SPDYE3A6NKU9 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
SPDYE3A6NKU9 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC25.67■■□□□ 1.7
SPDYE3A6NKU9 SF1-220ENST00000626028 704 ntTSL 2 BASIC25.67■■□□□ 1.7
SPDYE3A6NKU9 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
SPDYE3A6NKU9 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
SPDYE3A6NKU9 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC25.67■■□□□ 1.7
SPDYE3A6NKU9 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
SPDYE3A6NKU9 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
SPDYE3A6NKU9 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC25.66■■□□□ 1.7
SPDYE3A6NKU9 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
SPDYE3A6NKU9 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
SPDYE3A6NKU9 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC25.66■■□□□ 1.7
SPDYE3A6NKU9 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC25.66■■□□□ 1.7
SPDYE3A6NKU9 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC25.66■■□□□ 1.7
SPDYE3A6NKU9 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC25.66■■□□□ 1.7
SPDYE3A6NKU9 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
SPDYE3A6NKU9 AC135279.3-201ENST00000610945 1311 ntBASIC25.65■■□□□ 1.7
SPDYE3A6NKU9 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC25.65■■□□□ 1.7
SPDYE3A6NKU9 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC25.65■■□□□ 1.7
SPDYE3A6NKU9 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC25.65■■□□□ 1.7
SPDYE3A6NKU9 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
SPDYE3A6NKU9 MIR638-201ENST00000385237 100 ntBASIC25.65■■□□□ 1.7
SPDYE3A6NKU9 ASB1-202ENST00000409297 878 ntTSL 5 BASIC25.65■■□□□ 1.7
SPDYE3A6NKU9 AC106739.1-201ENST00000617035 715 ntBASIC25.65■■□□□ 1.7
SPDYE3A6NKU9 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC25.65■■□□□ 1.7
SPDYE3A6NKU9 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC25.65■■□□□ 1.7
SPDYE3A6NKU9 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
SPDYE3A6NKU9 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
SPDYE3A6NKU9 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
SPDYE3A6NKU9 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC25.64■■□□□ 1.7
SPDYE3A6NKU9 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC25.64■■□□□ 1.7
SPDYE3A6NKU9 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
SPDYE3A6NKU9 PTCHD3P2-201ENST00000424937 1205 ntBASIC25.64■■□□□ 1.7
SPDYE3A6NKU9 AC006455.2-201ENST00000429931 906 ntBASIC25.64■■□□□ 1.7
SPDYE3A6NKU9 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC25.64■■□□□ 1.7
SPDYE3A6NKU9 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC25.64■■□□□ 1.7
SPDYE3A6NKU9 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC25.64■■□□□ 1.69
SPDYE3A6NKU9 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
SPDYE3A6NKU9 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC25.63■■□□□ 1.69
SPDYE3A6NKU9 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC25.63■■□□□ 1.69
SPDYE3A6NKU9 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC25.63■■□□□ 1.69
SPDYE3A6NKU9 SERBP1P1-201ENST00000396021 1160 ntBASIC25.63■■□□□ 1.69
SPDYE3A6NKU9 AC024257.2-201ENST00000549699 147 ntBASIC25.63■■□□□ 1.69
SPDYE3A6NKU9 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC25.63■■□□□ 1.69
SPDYE3A6NKU9 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC25.63■■□□□ 1.69
SPDYE3A6NKU9 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
SPDYE3A6NKU9 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
SPDYE3A6NKU9 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
SPDYE3A6NKU9 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
SPDYE3A6NKU9 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC25.62■■□□□ 1.69
SPDYE3A6NKU9 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
SPDYE3A6NKU9 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
SPDYE3A6NKU9 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
SPDYE3A6NKU9 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
SPDYE3A6NKU9 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
SPDYE3A6NKU9 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC25.62■■□□□ 1.69
SPDYE3A6NKU9 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC25.62■■□□□ 1.69
SPDYE3A6NKU9 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
SPDYE3A6NKU9 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
SPDYE3A6NKU9 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC25.62■■□□□ 1.69
SPDYE3A6NKU9 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC25.62■■□□□ 1.69
SPDYE3A6NKU9 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
SPDYE3A6NKU9 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC25.61■■□□□ 1.69
SPDYE3A6NKU9 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC25.61■■□□□ 1.69
SPDYE3A6NKU9 AC144652.1-201ENST00000609974 1624 ntBASIC25.61■■□□□ 1.69
SPDYE3A6NKU9 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
SPDYE3A6NKU9 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
SPDYE3A6NKU9 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC25.6■■□□□ 1.69
SPDYE3A6NKU9 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC25.6■■□□□ 1.69
SPDYE3A6NKU9 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
SPDYE3A6NKU9 AC133561.4-201ENST00000566112 224 ntBASIC25.6■■□□□ 1.69
SPDYE3A6NKU9 AL138724.1-201ENST00000606771 1088 ntBASIC25.6■■□□□ 1.69
SPDYE3A6NKU9 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
SPDYE3A6NKU9 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
SPDYE3A6NKU9 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
SPDYE3A6NKU9 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
SPDYE3A6NKU9 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC25.59■■□□□ 1.69
SPDYE3A6NKU9 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
SPDYE3A6NKU9 FP325331.1-202ENST00000623531 1380 ntBASIC25.59■■□□□ 1.69
SPDYE3A6NKU9 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
SPDYE3A6NKU9 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC25.59■■□□□ 1.69
SPDYE3A6NKU9 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
SPDYE3A6NKU9 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC25.59■■□□□ 1.69
SPDYE3A6NKU9 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC25.59■■□□□ 1.69
SPDYE3A6NKU9 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC25.58■■□□□ 1.69
SPDYE3A6NKU9 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC25.58■■□□□ 1.69
SPDYE3A6NKU9 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC25.58■■□□□ 1.69
SPDYE3A6NKU9 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
SPDYE3A6NKU9 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.68
SPDYE3A6NKU9 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC25.58■■□□□ 1.68
SPDYE3A6NKU9 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.68
SPDYE3A6NKU9 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC25.58■■□□□ 1.68
SPDYE3A6NKU9 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC25.58■■□□□ 1.68
SPDYE3A6NKU9 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms