Protein–RNA interactions for Protein: Q96BP2

CHCHD1, Coiled-coil-helix-coiled-coil-helix domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD1Q96BP2 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CHCHD1Q96BP2 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
CHCHD1Q96BP2 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC16.48■□□□□ 0.23
CHCHD1Q96BP2 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
CHCHD1Q96BP2 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CHCHD1Q96BP2 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CHCHD1Q96BP2 COMT-203ENST00000403184 2217 ntTSL 2 BASIC16.48■□□□□ 0.23
CHCHD1Q96BP2 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
CHCHD1Q96BP2 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CHCHD1Q96BP2 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC16.48■□□□□ 0.23
CHCHD1Q96BP2 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
CHCHD1Q96BP2 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CHCHD1Q96BP2 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
CHCHD1Q96BP2 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CHCHD1Q96BP2 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CHCHD1Q96BP2 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CHCHD1Q96BP2 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
CHCHD1Q96BP2 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC16.47■□□□□ 0.23
CHCHD1Q96BP2 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CHCHD1Q96BP2 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CHCHD1Q96BP2 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC16.47■□□□□ 0.23
CHCHD1Q96BP2 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CHCHD1Q96BP2 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
CHCHD1Q96BP2 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CHCHD1Q96BP2 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
CHCHD1Q96BP2 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC16.47■□□□□ 0.23
CHCHD1Q96BP2 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CHCHD1Q96BP2 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
CHCHD1Q96BP2 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CHCHD1Q96BP2 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
CHCHD1Q96BP2 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
CHCHD1Q96BP2 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
CHCHD1Q96BP2 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CHCHD1Q96BP2 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC16.46■□□□□ 0.23
CHCHD1Q96BP2 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CHCHD1Q96BP2 AC005559.1-201ENST00000589661 871 ntBASIC16.46■□□□□ 0.23
CHCHD1Q96BP2 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
CHCHD1Q96BP2 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
CHCHD1Q96BP2 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CHCHD1Q96BP2 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CHCHD1Q96BP2 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
CHCHD1Q96BP2 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
CHCHD1Q96BP2 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC16.45■□□□□ 0.22
CHCHD1Q96BP2 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CHCHD1Q96BP2 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CHCHD1Q96BP2 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CHCHD1Q96BP2 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
CHCHD1Q96BP2 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CHCHD1Q96BP2 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CHCHD1Q96BP2 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC16.45■□□□□ 0.22
CHCHD1Q96BP2 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CHCHD1Q96BP2 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC16.45■□□□□ 0.22
CHCHD1Q96BP2 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CHCHD1Q96BP2 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
CHCHD1Q96BP2 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
CHCHD1Q96BP2 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CHCHD1Q96BP2 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
CHCHD1Q96BP2 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CHCHD1Q96BP2 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CHCHD1Q96BP2 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CHCHD1Q96BP2 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CHCHD1Q96BP2 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CHCHD1Q96BP2 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CHCHD1Q96BP2 AC026310.3-201ENST00000625186 2373 ntBASIC16.44■□□□□ 0.22
CHCHD1Q96BP2 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CHCHD1Q96BP2 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CHCHD1Q96BP2 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC16.44■□□□□ 0.22
CHCHD1Q96BP2 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CHCHD1Q96BP2 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CHCHD1Q96BP2 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CHCHD1Q96BP2 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CHCHD1Q96BP2 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CHCHD1Q96BP2 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
CHCHD1Q96BP2 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CHCHD1Q96BP2 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CHCHD1Q96BP2 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CHCHD1Q96BP2 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CHCHD1Q96BP2 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC16.43■□□□□ 0.22
CHCHD1Q96BP2 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CHCHD1Q96BP2 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
CHCHD1Q96BP2 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
CHCHD1Q96BP2 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CHCHD1Q96BP2 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC16.42■□□□□ 0.22
CHCHD1Q96BP2 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC16.42■□□□□ 0.22
CHCHD1Q96BP2 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CHCHD1Q96BP2 AC139530.1-201ENST00000575312 1977 ntBASIC16.42■□□□□ 0.22
CHCHD1Q96BP2 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CHCHD1Q96BP2 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CHCHD1Q96BP2 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CHCHD1Q96BP2 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CHCHD1Q96BP2 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CHCHD1Q96BP2 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CHCHD1Q96BP2 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
CHCHD1Q96BP2 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CHCHD1Q96BP2 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CHCHD1Q96BP2 AL359258.2-201ENST00000564063 1566 ntBASIC16.41■□□□□ 0.22
CHCHD1Q96BP2 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CHCHD1Q96BP2 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CHCHD1Q96BP2 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CHCHD1Q96BP2 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms