Protein–RNA interactions for Protein: Q8NBW4

SLC38A9, Sodium-coupled neutral amino acid transporter 9, humanhuman

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A9Q8NBW4 HES6-206ENST00000409574 738 ntTSL 2 BASIC21.4■■□□□ 1.02
SLC38A9Q8NBW4 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC21.4■■□□□ 1.02
SLC38A9Q8NBW4 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC21.4■■□□□ 1.02
SLC38A9Q8NBW4 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
SLC38A9Q8NBW4 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
SLC38A9Q8NBW4 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
SLC38A9Q8NBW4 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
SLC38A9Q8NBW4 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
SLC38A9Q8NBW4 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC21.39■■□□□ 1.01
SLC38A9Q8NBW4 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
SLC38A9Q8NBW4 AC105265.2-201ENST00000467189 838 ntBASIC21.39■■□□□ 1.01
SLC38A9Q8NBW4 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC21.39■■□□□ 1.01
SLC38A9Q8NBW4 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
SLC38A9Q8NBW4 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC21.39■■□□□ 1.01
SLC38A9Q8NBW4 MIR3181-201ENST00000578512 73 ntBASIC21.39■■□□□ 1.01
SLC38A9Q8NBW4 AC009086.3-201ENST00000623486 1008 ntBASIC21.39■■□□□ 1.01
SLC38A9Q8NBW4 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC21.39■■□□□ 1.01
SLC38A9Q8NBW4 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
SLC38A9Q8NBW4 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC21.39■■□□□ 1.01
SLC38A9Q8NBW4 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC21.39■■□□□ 1.01
SLC38A9Q8NBW4 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC21.39■■□□□ 1.01
SLC38A9Q8NBW4 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
SLC38A9Q8NBW4 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC21.39■■□□□ 1.01
SLC38A9Q8NBW4 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
SLC38A9Q8NBW4 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
SLC38A9Q8NBW4 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
SLC38A9Q8NBW4 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
SLC38A9Q8NBW4 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC21.38■■□□□ 1.01
SLC38A9Q8NBW4 AC091305.1-201ENST00000479476 895 ntBASIC21.38■■□□□ 1.01
SLC38A9Q8NBW4 STOX2-205ENST00000513034 807 ntTSL 3 BASIC21.38■■□□□ 1.01
SLC38A9Q8NBW4 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC21.38■■□□□ 1.01
SLC38A9Q8NBW4 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
SLC38A9Q8NBW4 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC21.38■■□□□ 1.01
SLC38A9Q8NBW4 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
SLC38A9Q8NBW4 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC21.37■■□□□ 1.01
SLC38A9Q8NBW4 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
SLC38A9Q8NBW4 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SLC38A9Q8NBW4 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
SLC38A9Q8NBW4 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC21.37■■□□□ 1.01
SLC38A9Q8NBW4 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC21.37■■□□□ 1.01
SLC38A9Q8NBW4 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC21.37■■□□□ 1.01
SLC38A9Q8NBW4 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SLC38A9Q8NBW4 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
SLC38A9Q8NBW4 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SLC38A9Q8NBW4 GTSE1-AS1-202ENST00000623117 1518 ntBASIC21.36■■□□□ 1.01
SLC38A9Q8NBW4 EED-207ENST00000528180 1745 ntTSL 5 BASIC21.36■■□□□ 1.01
SLC38A9Q8NBW4 EI24-213ENST00000618552 1747 ntTSL 5 BASIC21.36■■□□□ 1.01
SLC38A9Q8NBW4 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
SLC38A9Q8NBW4 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
SLC38A9Q8NBW4 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
SLC38A9Q8NBW4 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
SLC38A9Q8NBW4 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC21.36■■□□□ 1.01
SLC38A9Q8NBW4 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
SLC38A9Q8NBW4 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
SLC38A9Q8NBW4 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC21.36■■□□□ 1.01
SLC38A9Q8NBW4 AC136469.2-201ENST00000623944 1028 ntBASIC21.36■■□□□ 1.01
SLC38A9Q8NBW4 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
SLC38A9Q8NBW4 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC21.35■■□□□ 1.01
SLC38A9Q8NBW4 AC008764.7-201ENST00000593779 1081 ntBASIC21.35■■□□□ 1.01
SLC38A9Q8NBW4 CA15P2-201ENST00000611168 834 ntBASIC21.35■■□□□ 1.01
SLC38A9Q8NBW4 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SLC38A9Q8NBW4 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SLC38A9Q8NBW4 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC21.35■■□□□ 1.01
SLC38A9Q8NBW4 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SLC38A9Q8NBW4 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
SLC38A9Q8NBW4 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC21.34■■□□□ 1.01
SLC38A9Q8NBW4 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SLC38A9Q8NBW4 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC21.34■■□□□ 1.01
SLC38A9Q8NBW4 LGR4-203ENST00000480977 492 ntTSL 2 BASIC21.34■■□□□ 1.01
SLC38A9Q8NBW4 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC21.34■■□□□ 1.01
SLC38A9Q8NBW4 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC21.34■■□□□ 1.01
SLC38A9Q8NBW4 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC21.34■■□□□ 1.01
SLC38A9Q8NBW4 RASA4CP-201ENST00000424092 1398 ntBASIC21.34■■□□□ 1.01
SLC38A9Q8NBW4 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
SLC38A9Q8NBW4 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
SLC38A9Q8NBW4 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC21.33■■□□□ 1.01
SLC38A9Q8NBW4 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC21.33■■□□□ 1.01
SLC38A9Q8NBW4 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
SLC38A9Q8NBW4 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
SLC38A9Q8NBW4 RARRES2P6-201ENST00000567333 442 ntBASIC21.33■■□□□ 1.01
SLC38A9Q8NBW4 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC21.33■■□□□ 1.01
SLC38A9Q8NBW4 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
SLC38A9Q8NBW4 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
SLC38A9Q8NBW4 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
SLC38A9Q8NBW4 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SLC38A9Q8NBW4 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SLC38A9Q8NBW4 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SLC38A9Q8NBW4 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
SLC38A9Q8NBW4 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC21.32■■□□□ 1
SLC38A9Q8NBW4 ASB1-202ENST00000409297 878 ntTSL 5 BASIC21.32■■□□□ 1
SLC38A9Q8NBW4 RBM38-205ENST00000440234 686 ntTSL 2 BASIC21.32■■□□□ 1
SLC38A9Q8NBW4 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC21.32■■□□□ 1
SLC38A9Q8NBW4 AC027682.1-201ENST00000562846 899 ntBASIC21.32■■□□□ 1
SLC38A9Q8NBW4 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SLC38A9Q8NBW4 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
SLC38A9Q8NBW4 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SLC38A9Q8NBW4 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SLC38A9Q8NBW4 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SLC38A9Q8NBW4 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
SLC38A9Q8NBW4 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 157.2 ms