Protein–RNA interactions for Protein: Q8NAV1

PRPF38A, Pre-mRNA-splicing factor 38A, humanhuman

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38AQ8NAV1 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
PRPF38AQ8NAV1 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC26.19■■□□□ 1.78
PRPF38AQ8NAV1 MED17-227ENST00000640521 2047 ntTSL 5 BASIC26.19■■□□□ 1.78
PRPF38AQ8NAV1 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
PRPF38AQ8NAV1 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
PRPF38AQ8NAV1 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC26.18■■□□□ 1.78
PRPF38AQ8NAV1 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC26.18■■□□□ 1.78
PRPF38AQ8NAV1 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC26.18■■□□□ 1.78
PRPF38AQ8NAV1 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC26.18■■□□□ 1.78
PRPF38AQ8NAV1 MAG-206ENST00000597035 542 ntTSL 4 BASIC26.18■■□□□ 1.78
PRPF38AQ8NAV1 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC26.18■■□□□ 1.78
PRPF38AQ8NAV1 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC26.18■■□□□ 1.78
PRPF38AQ8NAV1 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC26.18■■□□□ 1.78
PRPF38AQ8NAV1 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
PRPF38AQ8NAV1 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC26.17■■□□□ 1.78
PRPF38AQ8NAV1 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC26.17■■□□□ 1.78
PRPF38AQ8NAV1 AC027682.1-201ENST00000562846 899 ntBASIC26.17■■□□□ 1.78
PRPF38AQ8NAV1 CA15P2-201ENST00000611168 834 ntBASIC26.17■■□□□ 1.78
PRPF38AQ8NAV1 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC26.17■■□□□ 1.78
PRPF38AQ8NAV1 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
PRPF38AQ8NAV1 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC26.16■■□□□ 1.78
PRPF38AQ8NAV1 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC26.16■■□□□ 1.78
PRPF38AQ8NAV1 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
PRPF38AQ8NAV1 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC26.16■■□□□ 1.78
PRPF38AQ8NAV1 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
PRPF38AQ8NAV1 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC26.15■■□□□ 1.78
PRPF38AQ8NAV1 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
PRPF38AQ8NAV1 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
PRPF38AQ8NAV1 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
PRPF38AQ8NAV1 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC26.15■■□□□ 1.78
PRPF38AQ8NAV1 RARRES2P6-201ENST00000567333 442 ntBASIC26.15■■□□□ 1.78
PRPF38AQ8NAV1 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC26.15■■□□□ 1.78
PRPF38AQ8NAV1 AC008764.7-201ENST00000593779 1081 ntBASIC26.15■■□□□ 1.78
PRPF38AQ8NAV1 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
PRPF38AQ8NAV1 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
PRPF38AQ8NAV1 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC26.15■■□□□ 1.78
PRPF38AQ8NAV1 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC26.15■■□□□ 1.78
PRPF38AQ8NAV1 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC26.14■■□□□ 1.78
PRPF38AQ8NAV1 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
PRPF38AQ8NAV1 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
PRPF38AQ8NAV1 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
PRPF38AQ8NAV1 RBM38-205ENST00000440234 686 ntTSL 2 BASIC26.14■■□□□ 1.78
PRPF38AQ8NAV1 STOX2-205ENST00000513034 807 ntTSL 3 BASIC26.14■■□□□ 1.78
PRPF38AQ8NAV1 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC26.14■■□□□ 1.78
PRPF38AQ8NAV1 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC26.14■■□□□ 1.78
PRPF38AQ8NAV1 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC26.14■■□□□ 1.77
PRPF38AQ8NAV1 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC26.14■■□□□ 1.77
PRPF38AQ8NAV1 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC26.13■■□□□ 1.77
PRPF38AQ8NAV1 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
PRPF38AQ8NAV1 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
PRPF38AQ8NAV1 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC26.13■■□□□ 1.77
PRPF38AQ8NAV1 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC26.13■■□□□ 1.77
PRPF38AQ8NAV1 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC26.12■■□□□ 1.77
PRPF38AQ8NAV1 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
PRPF38AQ8NAV1 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC26.12■■□□□ 1.77
PRPF38AQ8NAV1 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
PRPF38AQ8NAV1 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
PRPF38AQ8NAV1 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC26.12■■□□□ 1.77
PRPF38AQ8NAV1 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
PRPF38AQ8NAV1 GTSE1-AS1-202ENST00000623117 1518 ntBASIC26.12■■□□□ 1.77
PRPF38AQ8NAV1 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC26.12■■□□□ 1.77
PRPF38AQ8NAV1 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
PRPF38AQ8NAV1 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
PRPF38AQ8NAV1 AC141586.4-201ENST00000624558 1573 ntBASIC26.12■■□□□ 1.77
PRPF38AQ8NAV1 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC26.12■■□□□ 1.77
PRPF38AQ8NAV1 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
PRPF38AQ8NAV1 AC099791.1-201ENST00000416440 715 ntBASIC26.11■■□□□ 1.77
PRPF38AQ8NAV1 AC026271.2-201ENST00000428091 497 ntBASIC26.11■■□□□ 1.77
PRPF38AQ8NAV1 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
PRPF38AQ8NAV1 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC26.11■■□□□ 1.77
PRPF38AQ8NAV1 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC26.11■■□□□ 1.77
PRPF38AQ8NAV1 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC26.11■■□□□ 1.77
PRPF38AQ8NAV1 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
PRPF38AQ8NAV1 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC26.11■■□□□ 1.77
PRPF38AQ8NAV1 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
PRPF38AQ8NAV1 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
PRPF38AQ8NAV1 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC26.1■■□□□ 1.77
PRPF38AQ8NAV1 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC26.1■■□□□ 1.77
PRPF38AQ8NAV1 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
PRPF38AQ8NAV1 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
PRPF38AQ8NAV1 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
PRPF38AQ8NAV1 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
PRPF38AQ8NAV1 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
PRPF38AQ8NAV1 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC26.09■■□□□ 1.77
PRPF38AQ8NAV1 EED-207ENST00000528180 1745 ntTSL 5 BASIC26.09■■□□□ 1.77
PRPF38AQ8NAV1 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC26.09■■□□□ 1.77
PRPF38AQ8NAV1 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC26.09■■□□□ 1.77
PRPF38AQ8NAV1 AC233992.3-201ENST00000607491 485 ntBASIC26.09■■□□□ 1.77
PRPF38AQ8NAV1 pRNA.6-201ENST00000610482 90 ntBASIC26.09■■□□□ 1.77
PRPF38AQ8NAV1 pRNA.5-201ENST00000612139 90 ntBASIC26.09■■□□□ 1.77
PRPF38AQ8NAV1 pRNA.11-201ENST00000618423 90 ntBASIC26.09■■□□□ 1.77
PRPF38AQ8NAV1 pRNA.13-201ENST00000619112 90 ntBASIC26.09■■□□□ 1.77
PRPF38AQ8NAV1 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC26.09■■□□□ 1.77
PRPF38AQ8NAV1 AC020928.2-201ENST00000588717 2197 ntBASIC26.09■■□□□ 1.77
PRPF38AQ8NAV1 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
PRPF38AQ8NAV1 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC26.09■■□□□ 1.77
PRPF38AQ8NAV1 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC26.08■■□□□ 1.77
PRPF38AQ8NAV1 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC26.08■■□□□ 1.77
PRPF38AQ8NAV1 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
PRPF38AQ8NAV1 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC26.08■■□□□ 1.77
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms