Protein–RNA interactions for Protein: Q8NAE3

LINC01555, Putative uncharacterized protein encoded by LINC01555, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01555Q8NAE3 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
LINC01555Q8NAE3 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC21.85■■□□□ 1.09
LINC01555Q8NAE3 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
LINC01555Q8NAE3 PKM-204ENST00000449901 2526 ntTSL 2 BASIC21.84■■□□□ 1.09
LINC01555Q8NAE3 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
LINC01555Q8NAE3 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC21.84■■□□□ 1.09
LINC01555Q8NAE3 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
LINC01555Q8NAE3 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
LINC01555Q8NAE3 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC21.84■■□□□ 1.09
LINC01555Q8NAE3 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
LINC01555Q8NAE3 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC21.84■■□□□ 1.09
LINC01555Q8NAE3 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
LINC01555Q8NAE3 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
LINC01555Q8NAE3 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
LINC01555Q8NAE3 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC21.83■■□□□ 1.09
LINC01555Q8NAE3 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
LINC01555Q8NAE3 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC21.83■■□□□ 1.09
LINC01555Q8NAE3 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC21.83■■□□□ 1.09
LINC01555Q8NAE3 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
LINC01555Q8NAE3 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
LINC01555Q8NAE3 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
LINC01555Q8NAE3 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
LINC01555Q8NAE3 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.09
LINC01555Q8NAE3 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.08
LINC01555Q8NAE3 AC008406.3-201ENST00000620001 1374 ntBASIC21.83■■□□□ 1.08
LINC01555Q8NAE3 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC21.82■■□□□ 1.08
LINC01555Q8NAE3 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
LINC01555Q8NAE3 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
LINC01555Q8NAE3 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
LINC01555Q8NAE3 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
LINC01555Q8NAE3 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
LINC01555Q8NAE3 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
LINC01555Q8NAE3 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
LINC01555Q8NAE3 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC21.82■■□□□ 1.08
LINC01555Q8NAE3 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
LINC01555Q8NAE3 THRA-202ENST00000394121 2260 ntTSL 2 BASIC21.82■■□□□ 1.08
LINC01555Q8NAE3 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC21.82■■□□□ 1.08
LINC01555Q8NAE3 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
LINC01555Q8NAE3 C17orf82-201ENST00000623772 1530 ntBASIC21.81■■□□□ 1.08
LINC01555Q8NAE3 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC21.81■■□□□ 1.08
LINC01555Q8NAE3 AL136116.3-201ENST00000402907 1138 ntBASIC21.81■■□□□ 1.08
LINC01555Q8NAE3 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC21.81■■□□□ 1.08
LINC01555Q8NAE3 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
LINC01555Q8NAE3 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
LINC01555Q8NAE3 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC21.81■■□□□ 1.08
LINC01555Q8NAE3 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
LINC01555Q8NAE3 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
LINC01555Q8NAE3 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
LINC01555Q8NAE3 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
LINC01555Q8NAE3 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
LINC01555Q8NAE3 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC21.8■■□□□ 1.08
LINC01555Q8NAE3 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC21.8■■□□□ 1.08
LINC01555Q8NAE3 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
LINC01555Q8NAE3 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
LINC01555Q8NAE3 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
LINC01555Q8NAE3 GATM-206ENST00000558336 1522 ntTSL 2 BASIC21.8■■□□□ 1.08
LINC01555Q8NAE3 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
LINC01555Q8NAE3 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
LINC01555Q8NAE3 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
LINC01555Q8NAE3 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
LINC01555Q8NAE3 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
LINC01555Q8NAE3 H19-210ENST00000439725 1929 ntTSL 2 BASIC21.79■■□□□ 1.08
LINC01555Q8NAE3 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
LINC01555Q8NAE3 PEMT-206ENST00000435340 960 ntTSL 5 BASIC21.79■■□□□ 1.08
LINC01555Q8NAE3 NKILA-201ENST00000613231 537 ntTSL 4 BASIC21.79■■□□□ 1.08
LINC01555Q8NAE3 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
LINC01555Q8NAE3 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
LINC01555Q8NAE3 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC21.79■■□□□ 1.08
LINC01555Q8NAE3 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC21.79■■□□□ 1.08
LINC01555Q8NAE3 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
LINC01555Q8NAE3 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
LINC01555Q8NAE3 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
LINC01555Q8NAE3 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
LINC01555Q8NAE3 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
LINC01555Q8NAE3 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
LINC01555Q8NAE3 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
LINC01555Q8NAE3 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
LINC01555Q8NAE3 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
LINC01555Q8NAE3 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC21.77■■□□□ 1.08
LINC01555Q8NAE3 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
LINC01555Q8NAE3 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
LINC01555Q8NAE3 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
LINC01555Q8NAE3 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
LINC01555Q8NAE3 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
LINC01555Q8NAE3 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
LINC01555Q8NAE3 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
LINC01555Q8NAE3 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
LINC01555Q8NAE3 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
LINC01555Q8NAE3 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.07
LINC01555Q8NAE3 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC21.77■■□□□ 1.07
LINC01555Q8NAE3 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
LINC01555Q8NAE3 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC21.76■■□□□ 1.07
LINC01555Q8NAE3 SRD5A1P1-201ENST00000442297 786 ntBASIC21.76■■□□□ 1.07
LINC01555Q8NAE3 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC21.76■■□□□ 1.07
LINC01555Q8NAE3 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
LINC01555Q8NAE3 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
LINC01555Q8NAE3 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
LINC01555Q8NAE3 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
LINC01555Q8NAE3 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
LINC01555Q8NAE3 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC21.75■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms