Protein–RNA interactions for Protein: P38353

SSH1, Sec sixty-one protein homolog, yeastyeast

Known RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSH1P38353 RFU1YLR073C 603 nt4.07□□□□□ -1.76
SSH1P38353 MAP1YLR244C 1164 nt4.07□□□□□ -1.76
SSH1P38353 ROT1YMR200W 771 nt4.07□□□□□ -1.76
SSH1P38353 SLZ1YNL196C 897 nt4.07□□□□□ -1.76
SSH1P38353 HIS4YCL030C 2400 nt4.07□□□□□ -1.76
SSH1P38353 HMG1YML075C 3165 nt4.06□□□□□ -1.76
SSH1P38353 KGD1YIL125W 3045 nt4.06□□□□□ -1.76
SSH1P38353 TRS85YDR108W 2097 nt4.06□□□□□ -1.76
SSH1P38353 STE12YHR084W 2067 nt4.06□□□□□ -1.76
SSH1P38353 RPN5YDL147W 1338 nt4.06□□□□□ -1.76
SSH1P38353 RIP1YEL024W 648 nt4.06□□□□□ -1.76
SSH1P38353 ARO2YGL148W 1131 nt4.06□□□□□ -1.76
SSH1P38353 DCD1YHR144C 939 nt4.06□□□□□ -1.76
SSH1P38353 YIL014C-AYIL014C-A 315 nt4.06□□□□□ -1.76
SSH1P38353 YLR283WYLR283W 945 nt4.06□□□□□ -1.76
SSH1P38353 YIM1YMR152W 1098 nt4.06□□□□□ -1.76
SSH1P38353 YPR169W-AYPR169W-A 219 nt4.06□□□□□ -1.76
SSH1P38353 YPR170W-BYPR170W-B 258 nt4.06□□□□□ -1.76
SSH1P38353 MRE11YMR224C 2079 nt4.06□□□□□ -1.76
SSH1P38353 MTR10YOR160W 2919 nt4.05□□□□□ -1.76
SSH1P38353 TRM8YDL201W 861 nt4.05□□□□□ -1.76
SSH1P38353 WSS1YHR134W 810 nt4.05□□□□□ -1.76
SSH1P38353 TDA5YLR426W 981 nt4.05□□□□□ -1.76
SSH1P38353 MCM2YBL023C 2607 nt4.05□□□□□ -1.76
SSH1P38353 LYS2YBR115C 4179 nt4.04□□□□□ -1.76
SSH1P38353 TCO89YPL180W 2400 nt4.04□□□□□ -1.76
SSH1P38353 SLD2YKL108W 1362 nt4.04□□□□□ -1.76
SSH1P38353 KIC1YHR102W 3243 nt4.04□□□□□ -1.76
SSH1P38353 YDR545C-AYDR545C-A 480 nt4.04□□□□□ -1.76
SSH1P38353 YEL077W-AYEL077W-A 483 nt4.04□□□□□ -1.76
SSH1P38353 YER190C-BYER190C-B 483 nt4.04□□□□□ -1.76
SSH1P38353 YFL068WYFL068W 483 nt4.04□□□□□ -1.76
SSH1P38353 YGR296C-BYGR296C-B 483 nt4.04□□□□□ -1.76
SSH1P38353 YHL050W-AYHL050W-A 483 nt4.04□□□□□ -1.76
SSH1P38353 YHR219C-AYHR219C-A 483 nt4.04□□□□□ -1.76
SSH1P38353 YIL177W-AYIL177W-A 483 nt4.04□□□□□ -1.76
SSH1P38353 YJL225W-AYJL225W-A 483 nt4.04□□□□□ -1.76
SSH1P38353 AAD10YJR155W 867 nt4.04□□□□□ -1.76
SSH1P38353 YLL066W-AYLL066W-A 483 nt4.04□□□□□ -1.76
SSH1P38353 YLL067W-AYLL067W-A 483 nt4.04□□□□□ -1.76
SSH1P38353 YLR466C-AYLR466C-A 483 nt4.04□□□□□ -1.76
SSH1P38353 YLR467C-AYLR467C-A 483 nt4.04□□□□□ -1.76
SSH1P38353 YML133W-BYML133W-B 483 nt4.04□□□□□ -1.76
SSH1P38353 YNL339W-BYNL339W-B 483 nt4.04□□□□□ -1.76
SSH1P38353 BUD17YNR027W 954 nt4.04□□□□□ -1.76
SSH1P38353 AIF1YNR074C 1137 nt4.04□□□□□ -1.76
SSH1P38353 YBL113W-AYBL113W-A 483 nt4.04□□□□□ -1.76
SSH1P38353 YOR396C-AYOR396C-A 483 nt4.04□□□□□ -1.76
SSH1P38353 YPL283W-BYPL283W-B 483 nt4.04□□□□□ -1.76
SSH1P38353 YPR204C-AYPR204C-A 483 nt4.04□□□□□ -1.76
SSH1P38353 NUG1YER006W 1563 nt4.04□□□□□ -1.76
SSH1P38353 KEX1YGL203C 2190 nt4.04□□□□□ -1.76
SSH1P38353 MET3YJR010W 1536 nt4.04□□□□□ -1.76
SSH1P38353 HCM1YCR065W 1695 nt4.03□□□□□ -1.76
SSH1P38353 ATP5YDR298C 639 nt4.03□□□□□ -1.76
SSH1P38353 tK(CUU)CtK(CUU)C 73 nt4.03□□□□□ -1.76
SSH1P38353 tK(CUU)D1tK(CUU)D1 73 nt4.03□□□□□ -1.76
SSH1P38353 tK(CUU)D2tK(CUU)D2 73 nt4.03□□□□□ -1.76
SSH1P38353 tK(CUU)E1tK(CUU)E1 73 nt4.03□□□□□ -1.76
SSH1P38353 tK(CUU)E2tK(CUU)E2 73 nt4.03□□□□□ -1.76
SSH1P38353 tK(CUU)FtK(CUU)F 73 nt4.03□□□□□ -1.76
SSH1P38353 tK(CUU)G1tK(CUU)G1 73 nt4.03□□□□□ -1.76
SSH1P38353 tK(CUU)G2tK(CUU)G2 73 nt4.03□□□□□ -1.76
SSH1P38353 tK(CUU)G3tK(CUU)G3 73 nt4.03□□□□□ -1.76
SSH1P38353 tK(CUU)ItK(CUU)I 73 nt4.03□□□□□ -1.76
SSH1P38353 tK(CUU)JtK(CUU)J 73 nt4.03□□□□□ -1.76
SSH1P38353 tK(CUU)KtK(CUU)K 73 nt4.03□□□□□ -1.76
SSH1P38353 tK(CUU)MtK(CUU)M 73 nt4.03□□□□□ -1.76
SSH1P38353 tK(CUU)PtK(CUU)P 73 nt4.03□□□□□ -1.76
SSH1P38353 YIL028WYIL028W 399 nt4.03□□□□□ -1.76
SSH1P38353 APS1YLR170C 471 nt4.03□□□□□ -1.76
SSH1P38353 YOR292CYOR292C 930 nt4.03□□□□□ -1.76
SSH1P38353 ARC40YBR234C 1155 nt4.03□□□□□ -1.76
SSH1P38353 AKL1YBR059C 3327 nt4.03□□□□□ -1.76
SSH1P38353 UBP7YIL156W 3216 nt4.02□□□□□ -1.77
SSH1P38353 YER158CYER158C 1722 nt4.02□□□□□ -1.77
SSH1P38353 PUT2YHR037W 1728 nt4.02□□□□□ -1.77
SSH1P38353 FMP48YGR052W 1110 nt4.02□□□□□ -1.77
SSH1P38353 VPS29YHR012W 849 nt4.02□□□□□ -1.77
SSH1P38353 GPP1YIL053W 753 nt4.02□□□□□ -1.77
SSH1P38353 KTR2YKR061W 1278 nt4.02□□□□□ -1.77
SSH1P38353 YKR104WYKR104W 921 nt4.02□□□□□ -1.77
SSH1P38353 PAU17YLL025W 375 nt4.02□□□□□ -1.77
SSH1P38353 RRT7YLL030C 342 nt4.02□□□□□ -1.77
SSH1P38353 PML1YLR016C 615 nt4.02□□□□□ -1.77
SSH1P38353 TOM40YMR203W 1164 nt4.02□□□□□ -1.77
SSH1P38353 RFA2YNL312W 822 nt4.02□□□□□ -1.77
SSH1P38353 RMI1YPL024W 726 nt4.02□□□□□ -1.77
SSH1P38353 TAF12YDR145W 1620 nt4.02□□□□□ -1.77
SSH1P38353 AIM10YER087W 1731 nt4.01□□□□□ -1.77
SSH1P38353 DIP2YLR129W 2832 nt4.01□□□□□ -1.77
SSH1P38353 NOP8YOL144W 1455 nt4.01□□□□□ -1.77
SSH1P38353 IFM1YOL023W 2031 nt4.01□□□□□ -1.77
SSH1P38353 YAL047W-AYAL047W-A 330 nt4.01□□□□□ -1.77
SSH1P38353 GTR1YML121W 933 nt4.01□□□□□ -1.77
SSH1P38353 ELA1YNL230C 1140 nt4.01□□□□□ -1.77
SSH1P38353 YPL191CYPL191C 1083 nt4.01□□□□□ -1.77
SSH1P38353 SSO1YPL232W 873 nt4.01□□□□□ -1.77
SSH1P38353 OPT2YPR194C 2634 nt4.01□□□□□ -1.77
SSH1P38353 SWC3YAL011W 1878 nt4.01□□□□□ -1.77
Retrieved 100 of 7,029 protein–RNA pairs in 21.7 ms