Protein–RNA interactions for Protein: P13500

CCL2, C-C motif chemokine 2, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL2P13500 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC19.67■□□□□ 0.74
CCL2P13500 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
CCL2P13500 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
CCL2P13500 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCL2P13500 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
CCL2P13500 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CCL2P13500 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCL2P13500 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC19.66■□□□□ 0.74
CCL2P13500 AC131212.1-201ENST00000613771 668 ntBASIC19.66■□□□□ 0.74
CCL2P13500 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CCL2P13500 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
CCL2P13500 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCL2P13500 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
CCL2P13500 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
CCL2P13500 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCL2P13500 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CCL2P13500 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CCL2P13500 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC19.65■□□□□ 0.74
CCL2P13500 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC19.65■□□□□ 0.74
CCL2P13500 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC19.65■□□□□ 0.74
CCL2P13500 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCL2P13500 AL117332.1-201ENST00000622628 974 ntBASIC19.65■□□□□ 0.74
CCL2P13500 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCL2P13500 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCL2P13500 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
CCL2P13500 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
CCL2P13500 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC19.65■□□□□ 0.74
CCL2P13500 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCL2P13500 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCL2P13500 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CCL2P13500 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCL2P13500 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CCL2P13500 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
CCL2P13500 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CCL2P13500 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCL2P13500 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCL2P13500 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC19.64■□□□□ 0.73
CCL2P13500 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC19.64■□□□□ 0.73
CCL2P13500 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC19.64■□□□□ 0.73
CCL2P13500 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCL2P13500 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCL2P13500 CASK-201ENST00000378154 2494 ntTSL 5 BASIC19.63■□□□□ 0.73
CCL2P13500 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCL2P13500 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
CCL2P13500 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
CCL2P13500 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCL2P13500 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC19.63■□□□□ 0.73
CCL2P13500 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCL2P13500 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CCL2P13500 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC19.63■□□□□ 0.73
CCL2P13500 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC19.63■□□□□ 0.73
CCL2P13500 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC19.63■□□□□ 0.73
CCL2P13500 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC19.63■□□□□ 0.73
CCL2P13500 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCL2P13500 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
CCL2P13500 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC19.63■□□□□ 0.73
CCL2P13500 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
CCL2P13500 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CCL2P13500 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CCL2P13500 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCL2P13500 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
CCL2P13500 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCL2P13500 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CCL2P13500 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC19.62■□□□□ 0.73
CCL2P13500 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC19.62■□□□□ 0.73
CCL2P13500 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCL2P13500 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCL2P13500 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCL2P13500 TRIR-202ENST00000588213 841 ntTSL 3 BASIC19.62■□□□□ 0.73
CCL2P13500 AL356740.2-201ENST00000601559 647 ntBASIC19.62■□□□□ 0.73
CCL2P13500 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC19.62■□□□□ 0.73
CCL2P13500 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC19.62■□□□□ 0.73
CCL2P13500 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCL2P13500 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
CCL2P13500 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCL2P13500 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCL2P13500 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CCL2P13500 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCL2P13500 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC19.61■□□□□ 0.73
CCL2P13500 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC19.61■□□□□ 0.73
CCL2P13500 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
CCL2P13500 H19-210ENST00000439725 1929 ntTSL 2 BASIC19.61■□□□□ 0.73
CCL2P13500 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
CCL2P13500 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC19.6■□□□□ 0.73
CCL2P13500 SRR-208ENST00000576848 588 ntTSL 4 BASIC19.6■□□□□ 0.73
CCL2P13500 MIR3621-201ENST00000580529 85 ntBASIC19.6■□□□□ 0.73
CCL2P13500 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC19.6■□□□□ 0.73
CCL2P13500 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCL2P13500 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CCL2P13500 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCL2P13500 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCL2P13500 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC19.59■□□□□ 0.73
CCL2P13500 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCL2P13500 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCL2P13500 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCL2P13500 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCL2P13500 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
CCL2P13500 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC19.59■□□□□ 0.73
CCL2P13500 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC19.59■□□□□ 0.73
CCL2P13500 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 13 ms