Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
USB1Q9BQ65 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC20.06■□□□□ 0.8
USB1Q9BQ65 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
USB1Q9BQ65 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
USB1Q9BQ65 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
USB1Q9BQ65 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
USB1Q9BQ65 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
USB1Q9BQ65 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
USB1Q9BQ65 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
USB1Q9BQ65 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC20.05■□□□□ 0.8
USB1Q9BQ65 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
USB1Q9BQ65 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
USB1Q9BQ65 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
USB1Q9BQ65 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC20.05■□□□□ 0.8
USB1Q9BQ65 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC20.05■□□□□ 0.8
USB1Q9BQ65 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
USB1Q9BQ65 AC079834.2-201ENST00000609776 1949 ntBASIC20.05■□□□□ 0.8
USB1Q9BQ65 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
USB1Q9BQ65 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC20.05■□□□□ 0.8
USB1Q9BQ65 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
USB1Q9BQ65 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
USB1Q9BQ65 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
USB1Q9BQ65 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
USB1Q9BQ65 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
USB1Q9BQ65 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC20.04■□□□□ 0.8
USB1Q9BQ65 AL512631.2-201ENST00000604634 923 ntBASIC20.04■□□□□ 0.8
USB1Q9BQ65 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
USB1Q9BQ65 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
USB1Q9BQ65 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
USB1Q9BQ65 CD37-213ENST00000598095 1598 ntTSL 2 BASIC20.04■□□□□ 0.8
USB1Q9BQ65 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
USB1Q9BQ65 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
USB1Q9BQ65 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC20.03■□□□□ 0.8
USB1Q9BQ65 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
USB1Q9BQ65 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
USB1Q9BQ65 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
USB1Q9BQ65 RALB-208ENST00000631312 311 ntTSL 5 BASIC20.03■□□□□ 0.8
USB1Q9BQ65 AC012676.1-201ENST00000574705 1949 ntBASIC20.03■□□□□ 0.8
USB1Q9BQ65 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
USB1Q9BQ65 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC20.03■□□□□ 0.8
USB1Q9BQ65 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
USB1Q9BQ65 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
USB1Q9BQ65 THRA-202ENST00000394121 2260 ntTSL 2 BASIC20.02■□□□□ 0.8
USB1Q9BQ65 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
USB1Q9BQ65 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
USB1Q9BQ65 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC20.02■□□□□ 0.8
USB1Q9BQ65 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
USB1Q9BQ65 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
USB1Q9BQ65 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC20.02■□□□□ 0.8
USB1Q9BQ65 AL139246.5-201ENST00000606645 996 ntBASIC20.02■□□□□ 0.8
USB1Q9BQ65 AC092171.4-201ENST00000609130 632 ntBASIC20.02■□□□□ 0.8
USB1Q9BQ65 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
USB1Q9BQ65 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
USB1Q9BQ65 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
USB1Q9BQ65 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
USB1Q9BQ65 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
USB1Q9BQ65 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
USB1Q9BQ65 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
USB1Q9BQ65 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
USB1Q9BQ65 MTURN-203ENST00000409688 843 ntTSL 2 BASIC20.01■□□□□ 0.79
USB1Q9BQ65 SRD5A1P1-201ENST00000442297 786 ntBASIC20.01■□□□□ 0.79
USB1Q9BQ65 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC20.01■□□□□ 0.79
USB1Q9BQ65 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC20.01■□□□□ 0.79
USB1Q9BQ65 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
USB1Q9BQ65 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
USB1Q9BQ65 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC20.01■□□□□ 0.79
USB1Q9BQ65 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
USB1Q9BQ65 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC20■□□□□ 0.79
USB1Q9BQ65 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
USB1Q9BQ65 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
USB1Q9BQ65 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
USB1Q9BQ65 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC20■□□□□ 0.79
USB1Q9BQ65 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC20■□□□□ 0.79
USB1Q9BQ65 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC20■□□□□ 0.79
USB1Q9BQ65 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC20■□□□□ 0.79
USB1Q9BQ65 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC20■□□□□ 0.79
USB1Q9BQ65 DUX4L19-201ENST00000557448 1267 ntBASIC20■□□□□ 0.79
USB1Q9BQ65 MIR4466-201ENST00000606121 54 ntBASIC20■□□□□ 0.79
USB1Q9BQ65 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC20■□□□□ 0.79
USB1Q9BQ65 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
USB1Q9BQ65 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC20■□□□□ 0.79
USB1Q9BQ65 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
USB1Q9BQ65 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC20■□□□□ 0.79
USB1Q9BQ65 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
USB1Q9BQ65 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC19.99■□□□□ 0.79
USB1Q9BQ65 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
USB1Q9BQ65 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
USB1Q9BQ65 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
USB1Q9BQ65 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
USB1Q9BQ65 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC19.99■□□□□ 0.79
USB1Q9BQ65 QDPR-206ENST00000508623 601 ntTSL 3 BASIC19.99■□□□□ 0.79
USB1Q9BQ65 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC19.99■□□□□ 0.79
USB1Q9BQ65 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
USB1Q9BQ65 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
USB1Q9BQ65 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
USB1Q9BQ65 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
USB1Q9BQ65 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
USB1Q9BQ65 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
USB1Q9BQ65 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
USB1Q9BQ65 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC19.98■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 88.7 ms