Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
SCUBE3Q8IX30 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC23.89■■□□□ 1.42
SCUBE3Q8IX30 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC23.89■■□□□ 1.42
SCUBE3Q8IX30 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
SCUBE3Q8IX30 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
SCUBE3Q8IX30 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC23.89■■□□□ 1.42
SCUBE3Q8IX30 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
SCUBE3Q8IX30 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
SCUBE3Q8IX30 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC23.89■■□□□ 1.41
SCUBE3Q8IX30 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
SCUBE3Q8IX30 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
SCUBE3Q8IX30 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
SCUBE3Q8IX30 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
SCUBE3Q8IX30 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
SCUBE3Q8IX30 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC23.88■■□□□ 1.41
SCUBE3Q8IX30 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
SCUBE3Q8IX30 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC23.88■■□□□ 1.41
SCUBE3Q8IX30 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
SCUBE3Q8IX30 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
SCUBE3Q8IX30 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
SCUBE3Q8IX30 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
SCUBE3Q8IX30 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC23.87■■□□□ 1.41
SCUBE3Q8IX30 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC23.87■■□□□ 1.41
SCUBE3Q8IX30 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
SCUBE3Q8IX30 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC23.87■■□□□ 1.41
SCUBE3Q8IX30 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
SCUBE3Q8IX30 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC23.86■■□□□ 1.41
SCUBE3Q8IX30 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
SCUBE3Q8IX30 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC23.86■■□□□ 1.41
SCUBE3Q8IX30 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
SCUBE3Q8IX30 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC23.86■■□□□ 1.41
SCUBE3Q8IX30 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC23.86■■□□□ 1.41
SCUBE3Q8IX30 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC23.86■■□□□ 1.41
SCUBE3Q8IX30 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
SCUBE3Q8IX30 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC23.86■■□□□ 1.41
SCUBE3Q8IX30 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
SCUBE3Q8IX30 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
SCUBE3Q8IX30 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC23.85■■□□□ 1.41
SCUBE3Q8IX30 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC23.85■■□□□ 1.41
SCUBE3Q8IX30 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
SCUBE3Q8IX30 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
SCUBE3Q8IX30 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC23.85■■□□□ 1.41
SCUBE3Q8IX30 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC23.85■■□□□ 1.41
SCUBE3Q8IX30 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
SCUBE3Q8IX30 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
SCUBE3Q8IX30 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC23.85■■□□□ 1.41
SCUBE3Q8IX30 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC23.85■■□□□ 1.41
SCUBE3Q8IX30 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
SCUBE3Q8IX30 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC23.84■■□□□ 1.41
SCUBE3Q8IX30 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
SCUBE3Q8IX30 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC23.84■■□□□ 1.41
SCUBE3Q8IX30 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC23.84■■□□□ 1.41
SCUBE3Q8IX30 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
SCUBE3Q8IX30 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC23.84■■□□□ 1.41
SCUBE3Q8IX30 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC23.84■■□□□ 1.41
SCUBE3Q8IX30 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC23.84■■□□□ 1.41
SCUBE3Q8IX30 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC23.83■■□□□ 1.41
SCUBE3Q8IX30 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
SCUBE3Q8IX30 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
SCUBE3Q8IX30 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC23.83■■□□□ 1.41
SCUBE3Q8IX30 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC23.83■■□□□ 1.41
SCUBE3Q8IX30 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC23.83■■□□□ 1.41
SCUBE3Q8IX30 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC23.83■■□□□ 1.41
SCUBE3Q8IX30 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC23.83■■□□□ 1.41
SCUBE3Q8IX30 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC23.83■■□□□ 1.41
SCUBE3Q8IX30 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
SCUBE3Q8IX30 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC23.82■■□□□ 1.4
SCUBE3Q8IX30 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC23.82■■□□□ 1.4
SCUBE3Q8IX30 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
SCUBE3Q8IX30 AK3-203ENST00000447596 705 ntTSL 2 BASIC23.82■■□□□ 1.4
SCUBE3Q8IX30 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC23.82■■□□□ 1.4
SCUBE3Q8IX30 AL117332.1-201ENST00000622628 974 ntBASIC23.82■■□□□ 1.4
SCUBE3Q8IX30 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC23.82■■□□□ 1.4
SCUBE3Q8IX30 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
SCUBE3Q8IX30 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
SCUBE3Q8IX30 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
SCUBE3Q8IX30 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
SCUBE3Q8IX30 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
SCUBE3Q8IX30 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC23.81■■□□□ 1.4
SCUBE3Q8IX30 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC23.81■■□□□ 1.4
SCUBE3Q8IX30 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
SCUBE3Q8IX30 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
SCUBE3Q8IX30 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
SCUBE3Q8IX30 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
SCUBE3Q8IX30 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
SCUBE3Q8IX30 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC23.8■■□□□ 1.4
SCUBE3Q8IX30 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SCUBE3Q8IX30 MIR3621-201ENST00000580529 85 ntBASIC23.8■■□□□ 1.4
SCUBE3Q8IX30 AL356740.2-201ENST00000601559 647 ntBASIC23.8■■□□□ 1.4
SCUBE3Q8IX30 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC23.8■■□□□ 1.4
SCUBE3Q8IX30 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
SCUBE3Q8IX30 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SCUBE3Q8IX30 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC23.8■■□□□ 1.4
SCUBE3Q8IX30 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
SCUBE3Q8IX30 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
SCUBE3Q8IX30 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SCUBE3Q8IX30 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
SCUBE3Q8IX30 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC23.8■■□□□ 1.4
SCUBE3Q8IX30 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
SCUBE3Q8IX30 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC23.79■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms