Protein–RNA interactions for Protein: O43623

SNAI2, Zinc finger protein SNAI2, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI2O43623 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC16.84■□□□□ 0.29
SNAI2O43623 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC16.84■□□□□ 0.29
SNAI2O43623 GALC-202ENST00000393568 2054 ntTSL 2 BASIC16.84■□□□□ 0.29
SNAI2O43623 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
SNAI2O43623 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC16.83■□□□□ 0.29
SNAI2O43623 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SNAI2O43623 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
SNAI2O43623 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
SNAI2O43623 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
SNAI2O43623 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SNAI2O43623 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
SNAI2O43623 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SNAI2O43623 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SNAI2O43623 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC16.82■□□□□ 0.28
SNAI2O43623 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SNAI2O43623 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SNAI2O43623 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
SNAI2O43623 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC16.82■□□□□ 0.28
SNAI2O43623 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC16.82■□□□□ 0.28
SNAI2O43623 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SNAI2O43623 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SNAI2O43623 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
SNAI2O43623 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SNAI2O43623 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SNAI2O43623 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
SNAI2O43623 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SNAI2O43623 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
SNAI2O43623 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SNAI2O43623 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC16.82■□□□□ 0.28
SNAI2O43623 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
SNAI2O43623 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SNAI2O43623 ANOS2P-203ENST00000472227 1816 ntBASIC16.82■□□□□ 0.28
SNAI2O43623 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
SNAI2O43623 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
SNAI2O43623 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC16.81■□□□□ 0.28
SNAI2O43623 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SNAI2O43623 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SNAI2O43623 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SNAI2O43623 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SNAI2O43623 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC16.81■□□□□ 0.28
SNAI2O43623 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
SNAI2O43623 GFER-205ENST00000569451 517 ntTSL 5 BASIC16.81■□□□□ 0.28
SNAI2O43623 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC16.81■□□□□ 0.28
SNAI2O43623 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
SNAI2O43623 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
SNAI2O43623 AC092068.2-201ENST00000590491 1708 ntBASIC16.81■□□□□ 0.28
SNAI2O43623 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC16.81■□□□□ 0.28
SNAI2O43623 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
SNAI2O43623 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
SNAI2O43623 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
SNAI2O43623 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
SNAI2O43623 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
SNAI2O43623 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SNAI2O43623 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SNAI2O43623 DUSP8P3-201ENST00000399571 1760 ntBASIC16.8■□□□□ 0.28
SNAI2O43623 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SNAI2O43623 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SNAI2O43623 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC16.8■□□□□ 0.28
SNAI2O43623 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SNAI2O43623 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SNAI2O43623 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SNAI2O43623 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SNAI2O43623 AL161729.1-201ENST00000604104 1402 ntBASIC16.79■□□□□ 0.28
SNAI2O43623 AC233723.2-201ENST00000623798 2106 ntBASIC16.79■□□□□ 0.28
SNAI2O43623 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
SNAI2O43623 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC16.79■□□□□ 0.28
SNAI2O43623 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
SNAI2O43623 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SNAI2O43623 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SNAI2O43623 C1orf229-201ENST00000623686 2258 ntBASIC16.79■□□□□ 0.28
SNAI2O43623 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SNAI2O43623 TPT1-202ENST00000379055 948 ntTSL 2 BASIC16.79■□□□□ 0.28
SNAI2O43623 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SNAI2O43623 AC007029.1-201ENST00000604183 313 ntBASIC16.79■□□□□ 0.28
SNAI2O43623 RAP2CP1-202ENST00000605179 643 ntBASIC16.79■□□□□ 0.28
SNAI2O43623 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SNAI2O43623 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC16.79■□□□□ 0.28
SNAI2O43623 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SNAI2O43623 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC16.79■□□□□ 0.28
SNAI2O43623 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SNAI2O43623 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
SNAI2O43623 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SNAI2O43623 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
SNAI2O43623 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SNAI2O43623 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SNAI2O43623 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
SNAI2O43623 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SNAI2O43623 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SNAI2O43623 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC16.79■□□□□ 0.28
SNAI2O43623 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SNAI2O43623 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SNAI2O43623 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SNAI2O43623 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
SNAI2O43623 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SNAI2O43623 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SNAI2O43623 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SNAI2O43623 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
SNAI2O43623 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC16.78■□□□□ 0.28
SNAI2O43623 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SNAI2O43623 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms