Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC18.17■□□□□ 0.5
TCRBV4S1A1TA0A5B7 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TCRBV4S1A1TA0A5B7 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
TCRBV4S1A1TA0A5B7 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TCRBV4S1A1TA0A5B7 PEMT-206ENST00000435340 960 ntTSL 5 BASIC18.17■□□□□ 0.5
TCRBV4S1A1TA0A5B7 TRIR-202ENST00000588213 841 ntTSL 3 BASIC18.17■□□□□ 0.5
TCRBV4S1A1TA0A5B7 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TCRBV4S1A1TA0A5B7 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TCRBV4S1A1TA0A5B7 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC18.17■□□□□ 0.5
TCRBV4S1A1TA0A5B7 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TCRBV4S1A1TA0A5B7 AF131216.4-201ENST00000638924 1588 ntBASIC18.17■□□□□ 0.5
TCRBV4S1A1TA0A5B7 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
TCRBV4S1A1TA0A5B7 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TCRBV4S1A1TA0A5B7 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TCRBV4S1A1TA0A5B7 AL356740.2-201ENST00000601559 647 ntBASIC18.16■□□□□ 0.5
TCRBV4S1A1TA0A5B7 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC18.16■□□□□ 0.5
TCRBV4S1A1TA0A5B7 EXOG-217ENST00000630638 197 ntTSL 5 BASIC18.16■□□□□ 0.5
TCRBV4S1A1TA0A5B7 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
TCRBV4S1A1TA0A5B7 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TCRBV4S1A1TA0A5B7 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
TCRBV4S1A1TA0A5B7 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TCRBV4S1A1TA0A5B7 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
TCRBV4S1A1TA0A5B7 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TCRBV4S1A1TA0A5B7 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
TCRBV4S1A1TA0A5B7 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC18.15■□□□□ 0.5
TCRBV4S1A1TA0A5B7 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TCRBV4S1A1TA0A5B7 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
TCRBV4S1A1TA0A5B7 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TCRBV4S1A1TA0A5B7 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC18.15■□□□□ 0.5
TCRBV4S1A1TA0A5B7 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC18.15■□□□□ 0.5
TCRBV4S1A1TA0A5B7 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
TCRBV4S1A1TA0A5B7 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
TCRBV4S1A1TA0A5B7 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC18.15■□□□□ 0.5
TCRBV4S1A1TA0A5B7 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC18.15■□□□□ 0.5
TCRBV4S1A1TA0A5B7 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC18.15■□□□□ 0.5
TCRBV4S1A1TA0A5B7 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.5
TCRBV4S1A1TA0A5B7 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.5
TCRBV4S1A1TA0A5B7 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
TCRBV4S1A1TA0A5B7 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
TCRBV4S1A1TA0A5B7 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC18.14■□□□□ 0.49
TCRBV4S1A1TA0A5B7 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TCRBV4S1A1TA0A5B7 RPP21-222ENST00000433076 577 ntTSL 2 BASIC18.14■□□□□ 0.49
TCRBV4S1A1TA0A5B7 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC18.14■□□□□ 0.49
TCRBV4S1A1TA0A5B7 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC18.14■□□□□ 0.49
TCRBV4S1A1TA0A5B7 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC18.14■□□□□ 0.49
TCRBV4S1A1TA0A5B7 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC18.14■□□□□ 0.49
TCRBV4S1A1TA0A5B7 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC18.14■□□□□ 0.49
TCRBV4S1A1TA0A5B7 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC18.14■□□□□ 0.49
TCRBV4S1A1TA0A5B7 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TCRBV4S1A1TA0A5B7 LSM4-201ENST00000252816 986 ntTSL 2 BASIC18.13■□□□□ 0.49
TCRBV4S1A1TA0A5B7 AK3-203ENST00000447596 705 ntTSL 2 BASIC18.13■□□□□ 0.49
TCRBV4S1A1TA0A5B7 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TCRBV4S1A1TA0A5B7 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TCRBV4S1A1TA0A5B7 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TCRBV4S1A1TA0A5B7 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TCRBV4S1A1TA0A5B7 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TCRBV4S1A1TA0A5B7 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TCRBV4S1A1TA0A5B7 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TCRBV4S1A1TA0A5B7 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC18.12■□□□□ 0.49
TCRBV4S1A1TA0A5B7 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
TCRBV4S1A1TA0A5B7 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC18.12■□□□□ 0.49
TCRBV4S1A1TA0A5B7 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TCRBV4S1A1TA0A5B7 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC18.12■□□□□ 0.49
TCRBV4S1A1TA0A5B7 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC18.12■□□□□ 0.49
TCRBV4S1A1TA0A5B7 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC18.12■□□□□ 0.49
TCRBV4S1A1TA0A5B7 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC18.12■□□□□ 0.49
TCRBV4S1A1TA0A5B7 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC18.12■□□□□ 0.49
TCRBV4S1A1TA0A5B7 LSM7-203ENST00000585409 512 ntTSL 2 BASIC18.12■□□□□ 0.49
TCRBV4S1A1TA0A5B7 AL117332.1-201ENST00000622628 974 ntBASIC18.12■□□□□ 0.49
TCRBV4S1A1TA0A5B7 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC18.12■□□□□ 0.49
TCRBV4S1A1TA0A5B7 AC019069.1-201ENST00000610008 1333 ntBASIC18.12■□□□□ 0.49
TCRBV4S1A1TA0A5B7 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC18.12■□□□□ 0.49
TCRBV4S1A1TA0A5B7 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TCRBV4S1A1TA0A5B7 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
TCRBV4S1A1TA0A5B7 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC18.12■□□□□ 0.49
TCRBV4S1A1TA0A5B7 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TCRBV4S1A1TA0A5B7 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TCRBV4S1A1TA0A5B7 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TCRBV4S1A1TA0A5B7 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
TCRBV4S1A1TA0A5B7 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
TCRBV4S1A1TA0A5B7 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TCRBV4S1A1TA0A5B7 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
TCRBV4S1A1TA0A5B7 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC18.11■□□□□ 0.49
TCRBV4S1A1TA0A5B7 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC18.11■□□□□ 0.49
TCRBV4S1A1TA0A5B7 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC18.11■□□□□ 0.49
TCRBV4S1A1TA0A5B7 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC18.11■□□□□ 0.49
TCRBV4S1A1TA0A5B7 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
TCRBV4S1A1TA0A5B7 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
TCRBV4S1A1TA0A5B7 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC18.11■□□□□ 0.49
TCRBV4S1A1TA0A5B7 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
TCRBV4S1A1TA0A5B7 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
TCRBV4S1A1TA0A5B7 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC18.11■□□□□ 0.49
TCRBV4S1A1TA0A5B7 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TCRBV4S1A1TA0A5B7 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC18.11■□□□□ 0.49
TCRBV4S1A1TA0A5B7 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
TCRBV4S1A1TA0A5B7 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
TCRBV4S1A1TA0A5B7 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TCRBV4S1A1TA0A5B7 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TCRBV4S1A1TA0A5B7 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TCRBV4S1A1TA0A5B7 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms