Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC22.34■■□□□ 1.17
PDLIM5Q96HC4 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC22.34■■□□□ 1.17
PDLIM5Q96HC4 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
PDLIM5Q96HC4 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC22.34■■□□□ 1.17
PDLIM5Q96HC4 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
PDLIM5Q96HC4 ANOS2P-203ENST00000472227 1816 ntBASIC22.34■■□□□ 1.17
PDLIM5Q96HC4 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC22.33■■□□□ 1.17
PDLIM5Q96HC4 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC22.33■■□□□ 1.17
PDLIM5Q96HC4 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC22.33■■□□□ 1.17
PDLIM5Q96HC4 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
PDLIM5Q96HC4 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC22.33■■□□□ 1.17
PDLIM5Q96HC4 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC22.33■■□□□ 1.17
PDLIM5Q96HC4 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC22.33■■□□□ 1.17
PDLIM5Q96HC4 AC092068.2-201ENST00000590491 1708 ntBASIC22.33■■□□□ 1.17
PDLIM5Q96HC4 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
PDLIM5Q96HC4 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
PDLIM5Q96HC4 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
PDLIM5Q96HC4 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
PDLIM5Q96HC4 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC22.32■■□□□ 1.16
PDLIM5Q96HC4 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
PDLIM5Q96HC4 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC22.32■■□□□ 1.16
PDLIM5Q96HC4 NFE2L3P1-201ENST00000588207 1959 ntBASIC22.32■■□□□ 1.16
PDLIM5Q96HC4 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
PDLIM5Q96HC4 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
PDLIM5Q96HC4 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
PDLIM5Q96HC4 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC22.31■■□□□ 1.16
PDLIM5Q96HC4 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC22.31■■□□□ 1.16
PDLIM5Q96HC4 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC22.31■■□□□ 1.16
PDLIM5Q96HC4 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
PDLIM5Q96HC4 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC22.31■■□□□ 1.16
PDLIM5Q96HC4 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
PDLIM5Q96HC4 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC22.31■■□□□ 1.16
PDLIM5Q96HC4 TK2-202ENST00000417693 1046 ntTSL 2 BASIC22.31■■□□□ 1.16
PDLIM5Q96HC4 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
PDLIM5Q96HC4 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC22.31■■□□□ 1.16
PDLIM5Q96HC4 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC22.31■■□□□ 1.16
PDLIM5Q96HC4 SNX5-217ENST00000606557 1087 ntBASIC22.31■■□□□ 1.16
PDLIM5Q96HC4 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC22.31■■□□□ 1.16
PDLIM5Q96HC4 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
PDLIM5Q96HC4 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
PDLIM5Q96HC4 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
PDLIM5Q96HC4 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
PDLIM5Q96HC4 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
PDLIM5Q96HC4 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
PDLIM5Q96HC4 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
PDLIM5Q96HC4 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
PDLIM5Q96HC4 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
PDLIM5Q96HC4 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
PDLIM5Q96HC4 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
PDLIM5Q96HC4 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
PDLIM5Q96HC4 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC22.29■■□□□ 1.16
PDLIM5Q96HC4 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
PDLIM5Q96HC4 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
PDLIM5Q96HC4 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC22.29■■□□□ 1.16
PDLIM5Q96HC4 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
PDLIM5Q96HC4 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
PDLIM5Q96HC4 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
PDLIM5Q96HC4 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
PDLIM5Q96HC4 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC22.28■■□□□ 1.16
PDLIM5Q96HC4 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
PDLIM5Q96HC4 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
PDLIM5Q96HC4 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC22.28■■□□□ 1.16
PDLIM5Q96HC4 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
PDLIM5Q96HC4 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC22.28■■□□□ 1.16
PDLIM5Q96HC4 SENP5-202ENST00000419026 973 ntTSL 3 BASIC22.28■■□□□ 1.16
PDLIM5Q96HC4 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
PDLIM5Q96HC4 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
PDLIM5Q96HC4 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC22.28■■□□□ 1.16
PDLIM5Q96HC4 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
PDLIM5Q96HC4 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
PDLIM5Q96HC4 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
PDLIM5Q96HC4 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC22.27■■□□□ 1.16
PDLIM5Q96HC4 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.16
PDLIM5Q96HC4 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
PDLIM5Q96HC4 AC021242.3-201ENST00000607598 1377 ntBASIC22.27■■□□□ 1.16
PDLIM5Q96HC4 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
PDLIM5Q96HC4 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
PDLIM5Q96HC4 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC22.27■■□□□ 1.16
PDLIM5Q96HC4 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC22.27■■□□□ 1.16
PDLIM5Q96HC4 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC22.27■■□□□ 1.16
PDLIM5Q96HC4 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC22.27■■□□□ 1.16
PDLIM5Q96HC4 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC22.27■■□□□ 1.16
PDLIM5Q96HC4 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC22.27■■□□□ 1.16
PDLIM5Q96HC4 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC22.27■■□□□ 1.15
PDLIM5Q96HC4 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
PDLIM5Q96HC4 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
PDLIM5Q96HC4 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
PDLIM5Q96HC4 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC22.26■■□□□ 1.15
PDLIM5Q96HC4 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
PDLIM5Q96HC4 PRTG-204ENST00000561292 833 ntTSL 3 BASIC22.26■■□□□ 1.15
PDLIM5Q96HC4 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC22.26■■□□□ 1.15
PDLIM5Q96HC4 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
PDLIM5Q96HC4 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
PDLIM5Q96HC4 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
PDLIM5Q96HC4 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
PDLIM5Q96HC4 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC22.25■■□□□ 1.15
PDLIM5Q96HC4 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
PDLIM5Q96HC4 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC22.25■■□□□ 1.15
PDLIM5Q96HC4 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC22.25■■□□□ 1.15
PDLIM5Q96HC4 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms