Protein–RNA interactions for Protein: Q8NE22

SETD9, SET domain-containing protein 9, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SETD9Q8NE22 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
SETD9Q8NE22 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC20.89■□□□□ 0.94
SETD9Q8NE22 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
SETD9Q8NE22 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC20.89■□□□□ 0.93
SETD9Q8NE22 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
SETD9Q8NE22 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC20.89■□□□□ 0.93
SETD9Q8NE22 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SETD9Q8NE22 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SETD9Q8NE22 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SETD9Q8NE22 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC20.88■□□□□ 0.93
SETD9Q8NE22 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SETD9Q8NE22 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SETD9Q8NE22 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SETD9Q8NE22 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SETD9Q8NE22 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SETD9Q8NE22 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
SETD9Q8NE22 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SETD9Q8NE22 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
SETD9Q8NE22 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SETD9Q8NE22 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SETD9Q8NE22 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
SETD9Q8NE22 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SETD9Q8NE22 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.87■□□□□ 0.93
SETD9Q8NE22 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SETD9Q8NE22 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SETD9Q8NE22 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC20.87■□□□□ 0.93
SETD9Q8NE22 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC20.87■□□□□ 0.93
SETD9Q8NE22 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC20.87■□□□□ 0.93
SETD9Q8NE22 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC20.87■□□□□ 0.93
SETD9Q8NE22 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
SETD9Q8NE22 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
SETD9Q8NE22 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SETD9Q8NE22 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC20.86■□□□□ 0.93
SETD9Q8NE22 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC20.86■□□□□ 0.93
SETD9Q8NE22 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
SETD9Q8NE22 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC20.86■□□□□ 0.93
SETD9Q8NE22 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.86■□□□□ 0.93
SETD9Q8NE22 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SETD9Q8NE22 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SETD9Q8NE22 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
SETD9Q8NE22 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
SETD9Q8NE22 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
SETD9Q8NE22 AL161729.1-201ENST00000604104 1402 ntBASIC20.86■□□□□ 0.93
SETD9Q8NE22 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SETD9Q8NE22 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
SETD9Q8NE22 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SETD9Q8NE22 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC20.85■□□□□ 0.93
SETD9Q8NE22 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SETD9Q8NE22 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SETD9Q8NE22 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SETD9Q8NE22 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC20.85■□□□□ 0.93
SETD9Q8NE22 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SETD9Q8NE22 AC242852.2-201ENST00000615738 1807 ntBASIC20.85■□□□□ 0.93
SETD9Q8NE22 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20.85■□□□□ 0.93
SETD9Q8NE22 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SETD9Q8NE22 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC20.84■□□□□ 0.93
SETD9Q8NE22 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
SETD9Q8NE22 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SETD9Q8NE22 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SETD9Q8NE22 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
SETD9Q8NE22 KRT18P10-201ENST00000388836 1287 ntBASIC20.84■□□□□ 0.93
SETD9Q8NE22 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.84■□□□□ 0.93
SETD9Q8NE22 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
SETD9Q8NE22 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SETD9Q8NE22 EI24-213ENST00000618552 1747 ntTSL 5 BASIC20.84■□□□□ 0.93
SETD9Q8NE22 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SETD9Q8NE22 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
SETD9Q8NE22 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC20.83■□□□□ 0.93
SETD9Q8NE22 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
SETD9Q8NE22 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC20.83■□□□□ 0.93
SETD9Q8NE22 AL157400.5-201ENST00000507624 621 ntBASIC20.83■□□□□ 0.93
SETD9Q8NE22 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
SETD9Q8NE22 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
SETD9Q8NE22 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
SETD9Q8NE22 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
SETD9Q8NE22 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SETD9Q8NE22 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC20.83■□□□□ 0.92
SETD9Q8NE22 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
SETD9Q8NE22 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
SETD9Q8NE22 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC20.82■□□□□ 0.92
SETD9Q8NE22 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
SETD9Q8NE22 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SETD9Q8NE22 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC20.82■□□□□ 0.92
SETD9Q8NE22 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SETD9Q8NE22 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SETD9Q8NE22 AC007375.3-201ENST00000600936 2314 ntBASIC20.82■□□□□ 0.92
SETD9Q8NE22 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
SETD9Q8NE22 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
SETD9Q8NE22 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SETD9Q8NE22 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC20.81■□□□□ 0.92
SETD9Q8NE22 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SETD9Q8NE22 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SETD9Q8NE22 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
SETD9Q8NE22 AL024507.2-201ENST00000606070 2574 ntBASIC20.81■□□□□ 0.92
SETD9Q8NE22 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SETD9Q8NE22 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC20.81■□□□□ 0.92
SETD9Q8NE22 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC20.81■□□□□ 0.92
SETD9Q8NE22 ESRRAP2-201ENST00000418437 1549 ntBASIC20.81■□□□□ 0.92
SETD9Q8NE22 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
SETD9Q8NE22 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 83.1 ms