Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC17.95■□□□□ 0.46
TTC9CQ8N5M4 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TTC9CQ8N5M4 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
TTC9CQ8N5M4 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC17.95■□□□□ 0.46
TTC9CQ8N5M4 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TTC9CQ8N5M4 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TTC9CQ8N5M4 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC17.95■□□□□ 0.46
TTC9CQ8N5M4 RARA-203ENST00000394086 2008 ntTSL 2 BASIC17.94■□□□□ 0.46
TTC9CQ8N5M4 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TTC9CQ8N5M4 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
TTC9CQ8N5M4 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TTC9CQ8N5M4 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC17.94■□□□□ 0.46
TTC9CQ8N5M4 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC17.94■□□□□ 0.46
TTC9CQ8N5M4 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TTC9CQ8N5M4 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC17.94■□□□□ 0.46
TTC9CQ8N5M4 RARRES2P1-201ENST00000474487 481 ntBASIC17.94■□□□□ 0.46
TTC9CQ8N5M4 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TTC9CQ8N5M4 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TTC9CQ8N5M4 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC17.94■□□□□ 0.46
TTC9CQ8N5M4 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TTC9CQ8N5M4 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TTC9CQ8N5M4 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
TTC9CQ8N5M4 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TTC9CQ8N5M4 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
TTC9CQ8N5M4 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC17.93■□□□□ 0.46
TTC9CQ8N5M4 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TTC9CQ8N5M4 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TTC9CQ8N5M4 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TTC9CQ8N5M4 BX664725.1-201ENST00000438252 379 ntBASIC17.93■□□□□ 0.46
TTC9CQ8N5M4 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC17.93■□□□□ 0.46
TTC9CQ8N5M4 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC17.93■□□□□ 0.46
TTC9CQ8N5M4 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC17.93■□□□□ 0.46
TTC9CQ8N5M4 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC17.93■□□□□ 0.46
TTC9CQ8N5M4 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TTC9CQ8N5M4 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC17.93■□□□□ 0.46
TTC9CQ8N5M4 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TTC9CQ8N5M4 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TTC9CQ8N5M4 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TTC9CQ8N5M4 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
TTC9CQ8N5M4 AC021242.3-201ENST00000607598 1377 ntBASIC17.92■□□□□ 0.46
TTC9CQ8N5M4 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
TTC9CQ8N5M4 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC17.92■□□□□ 0.46
TTC9CQ8N5M4 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
TTC9CQ8N5M4 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC17.92■□□□□ 0.46
TTC9CQ8N5M4 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TTC9CQ8N5M4 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TTC9CQ8N5M4 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
TTC9CQ8N5M4 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TTC9CQ8N5M4 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TTC9CQ8N5M4 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TTC9CQ8N5M4 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
TTC9CQ8N5M4 SNX5-217ENST00000606557 1087 ntBASIC17.92■□□□□ 0.46
TTC9CQ8N5M4 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TTC9CQ8N5M4 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
TTC9CQ8N5M4 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TTC9CQ8N5M4 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
TTC9CQ8N5M4 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC17.91■□□□□ 0.46
TTC9CQ8N5M4 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
TTC9CQ8N5M4 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TTC9CQ8N5M4 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
TTC9CQ8N5M4 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
TTC9CQ8N5M4 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC17.9■□□□□ 0.46
TTC9CQ8N5M4 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TTC9CQ8N5M4 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TTC9CQ8N5M4 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
TTC9CQ8N5M4 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TTC9CQ8N5M4 SENP5-202ENST00000419026 973 ntTSL 3 BASIC17.9■□□□□ 0.46
TTC9CQ8N5M4 RNF146-205ENST00000477776 762 ntTSL 3 BASIC17.9■□□□□ 0.46
TTC9CQ8N5M4 Z92544.1-202ENST00000571933 1220 ntBASIC17.9■□□□□ 0.46
TTC9CQ8N5M4 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC17.9■□□□□ 0.46
TTC9CQ8N5M4 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC17.9■□□□□ 0.46
TTC9CQ8N5M4 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC17.9■□□□□ 0.46
TTC9CQ8N5M4 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
TTC9CQ8N5M4 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
TTC9CQ8N5M4 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
TTC9CQ8N5M4 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.46
TTC9CQ8N5M4 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
TTC9CQ8N5M4 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TTC9CQ8N5M4 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TTC9CQ8N5M4 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
TTC9CQ8N5M4 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC17.89■□□□□ 0.45
TTC9CQ8N5M4 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TTC9CQ8N5M4 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
TTC9CQ8N5M4 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC17.89■□□□□ 0.45
TTC9CQ8N5M4 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TTC9CQ8N5M4 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC17.89■□□□□ 0.45
TTC9CQ8N5M4 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
TTC9CQ8N5M4 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TTC9CQ8N5M4 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TTC9CQ8N5M4 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TTC9CQ8N5M4 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TTC9CQ8N5M4 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TTC9CQ8N5M4 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TTC9CQ8N5M4 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TTC9CQ8N5M4 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC17.87■□□□□ 0.45
TTC9CQ8N5M4 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TTC9CQ8N5M4 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC17.87■□□□□ 0.45
TTC9CQ8N5M4 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TTC9CQ8N5M4 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC17.87■□□□□ 0.45
TTC9CQ8N5M4 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms