Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
LYSMD4Q5XG99 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC22.58■■□□□ 1.21
LYSMD4Q5XG99 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC22.58■■□□□ 1.21
LYSMD4Q5XG99 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
LYSMD4Q5XG99 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC22.58■■□□□ 1.21
LYSMD4Q5XG99 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC22.58■■□□□ 1.21
LYSMD4Q5XG99 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC22.58■■□□□ 1.21
LYSMD4Q5XG99 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC22.58■■□□□ 1.21
LYSMD4Q5XG99 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC22.58■■□□□ 1.21
LYSMD4Q5XG99 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC22.58■■□□□ 1.21
LYSMD4Q5XG99 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
LYSMD4Q5XG99 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC22.58■■□□□ 1.21
LYSMD4Q5XG99 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC22.58■■□□□ 1.2
LYSMD4Q5XG99 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC22.58■■□□□ 1.2
LYSMD4Q5XG99 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC22.57■■□□□ 1.2
LYSMD4Q5XG99 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
LYSMD4Q5XG99 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
LYSMD4Q5XG99 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC22.57■■□□□ 1.2
LYSMD4Q5XG99 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC22.57■■□□□ 1.2
LYSMD4Q5XG99 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
LYSMD4Q5XG99 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC22.57■■□□□ 1.2
LYSMD4Q5XG99 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC22.57■■□□□ 1.2
LYSMD4Q5XG99 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC22.57■■□□□ 1.2
LYSMD4Q5XG99 AC090192.1-201ENST00000517740 490 ntBASIC22.57■■□□□ 1.2
LYSMD4Q5XG99 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
LYSMD4Q5XG99 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC22.57■■□□□ 1.2
LYSMD4Q5XG99 NKILA-201ENST00000613231 537 ntTSL 4 BASIC22.57■■□□□ 1.2
LYSMD4Q5XG99 RARRES2P11-201ENST00000635158 484 ntBASIC22.57■■□□□ 1.2
LYSMD4Q5XG99 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC22.57■■□□□ 1.2
LYSMD4Q5XG99 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC22.57■■□□□ 1.2
LYSMD4Q5XG99 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC22.57■■□□□ 1.2
LYSMD4Q5XG99 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
LYSMD4Q5XG99 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC22.57■■□□□ 1.2
LYSMD4Q5XG99 VGF-203ENST00000611537 1622 ntTSL 5 BASIC22.57■■□□□ 1.2
LYSMD4Q5XG99 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC22.56■■□□□ 1.2
LYSMD4Q5XG99 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
LYSMD4Q5XG99 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC22.56■■□□□ 1.2
LYSMD4Q5XG99 SNX3-202ENST00000349379 890 ntTSL 2 BASIC22.56■■□□□ 1.2
LYSMD4Q5XG99 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
LYSMD4Q5XG99 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
LYSMD4Q5XG99 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC22.56■■□□□ 1.2
LYSMD4Q5XG99 YBX1P1-201ENST00000445822 960 ntBASIC22.56■■□□□ 1.2
LYSMD4Q5XG99 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
LYSMD4Q5XG99 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC22.56■■□□□ 1.2
LYSMD4Q5XG99 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC22.56■■□□□ 1.2
LYSMD4Q5XG99 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
LYSMD4Q5XG99 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
LYSMD4Q5XG99 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
LYSMD4Q5XG99 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
LYSMD4Q5XG99 pRNA.6-201ENST00000610482 90 ntBASIC22.55■■□□□ 1.2
LYSMD4Q5XG99 pRNA.5-201ENST00000612139 90 ntBASIC22.55■■□□□ 1.2
LYSMD4Q5XG99 pRNA.11-201ENST00000618423 90 ntBASIC22.55■■□□□ 1.2
LYSMD4Q5XG99 pRNA.13-201ENST00000619112 90 ntBASIC22.55■■□□□ 1.2
LYSMD4Q5XG99 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
LYSMD4Q5XG99 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
LYSMD4Q5XG99 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC22.55■■□□□ 1.2
LYSMD4Q5XG99 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC22.54■■□□□ 1.2
LYSMD4Q5XG99 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
LYSMD4Q5XG99 NME4-202ENST00000382940 766 ntTSL 3 BASIC22.54■■□□□ 1.2
LYSMD4Q5XG99 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC22.54■■□□□ 1.2
LYSMD4Q5XG99 AC022517.1-201ENST00000592429 346 ntBASIC22.54■■□□□ 1.2
LYSMD4Q5XG99 AL137784.2-201ENST00000607332 1000 ntBASIC22.54■■□□□ 1.2
LYSMD4Q5XG99 IKBKGP1-201ENST00000612193 1073 ntBASIC22.54■■□□□ 1.2
LYSMD4Q5XG99 NME4-211ENST00000620944 1193 ntTSL 2 BASIC22.54■■□□□ 1.2
LYSMD4Q5XG99 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC22.53■■□□□ 1.2
LYSMD4Q5XG99 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
LYSMD4Q5XG99 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC22.53■■□□□ 1.2
LYSMD4Q5XG99 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC22.53■■□□□ 1.2
LYSMD4Q5XG99 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC22.53■■□□□ 1.2
LYSMD4Q5XG99 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC22.53■■□□□ 1.2
LYSMD4Q5XG99 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
LYSMD4Q5XG99 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
LYSMD4Q5XG99 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
LYSMD4Q5XG99 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
LYSMD4Q5XG99 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
LYSMD4Q5XG99 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC22.52■■□□□ 1.2
LYSMD4Q5XG99 HACD1-201ENST00000326961 773 ntTSL 2 BASIC22.52■■□□□ 1.2
LYSMD4Q5XG99 KRT18P5-201ENST00000436075 1291 ntBASIC22.52■■□□□ 1.2
LYSMD4Q5XG99 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC22.52■■□□□ 1.2
LYSMD4Q5XG99 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
LYSMD4Q5XG99 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC22.52■■□□□ 1.2
LYSMD4Q5XG99 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC22.52■■□□□ 1.2
LYSMD4Q5XG99 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
LYSMD4Q5XG99 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
LYSMD4Q5XG99 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.2
LYSMD4Q5XG99 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC22.52■■□□□ 1.2
LYSMD4Q5XG99 TSPY26P-201ENST00000476365 1326 ntBASIC22.52■■□□□ 1.2
LYSMD4Q5XG99 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC22.51■■□□□ 1.19
LYSMD4Q5XG99 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC22.51■■□□□ 1.19
LYSMD4Q5XG99 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC22.51■■□□□ 1.19
LYSMD4Q5XG99 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC22.51■■□□□ 1.19
LYSMD4Q5XG99 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
LYSMD4Q5XG99 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
LYSMD4Q5XG99 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC22.5■■□□□ 1.19
LYSMD4Q5XG99 LSR-205ENST00000427250 1606 ntTSL 2 BASIC22.5■■□□□ 1.19
LYSMD4Q5XG99 AL031602.1-201ENST00000633169 911 ntBASIC22.5■■□□□ 1.19
LYSMD4Q5XG99 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
LYSMD4Q5XG99 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC22.5■■□□□ 1.19
LYSMD4Q5XG99 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
LYSMD4Q5XG99 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC22.49■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms