Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC20.16■□□□□ 0.82
CNOT4O95628 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
CNOT4O95628 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC20.16■□□□□ 0.82
CNOT4O95628 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CNOT4O95628 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
CNOT4O95628 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CNOT4O95628 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC20.15■□□□□ 0.82
CNOT4O95628 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CNOT4O95628 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC20.15■□□□□ 0.82
CNOT4O95628 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
CNOT4O95628 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
CNOT4O95628 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC20.15■□□□□ 0.82
CNOT4O95628 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC20.15■□□□□ 0.82
CNOT4O95628 AC141586.4-201ENST00000624558 1573 ntBASIC20.15■□□□□ 0.82
CNOT4O95628 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
CNOT4O95628 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CNOT4O95628 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CNOT4O95628 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC20.14■□□□□ 0.81
CNOT4O95628 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CNOT4O95628 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC20.14■□□□□ 0.81
CNOT4O95628 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CNOT4O95628 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CNOT4O95628 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CNOT4O95628 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
CNOT4O95628 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
CNOT4O95628 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
CNOT4O95628 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CNOT4O95628 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC20.13■□□□□ 0.81
CNOT4O95628 AC131281.2-201ENST00000520478 145 ntBASIC20.13■□□□□ 0.81
CNOT4O95628 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC20.13■□□□□ 0.81
CNOT4O95628 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC20.13■□□□□ 0.81
CNOT4O95628 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CNOT4O95628 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
CNOT4O95628 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
CNOT4O95628 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CNOT4O95628 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CNOT4O95628 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.12■□□□□ 0.81
CNOT4O95628 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC20.12■□□□□ 0.81
CNOT4O95628 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CNOT4O95628 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
CNOT4O95628 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC20.12■□□□□ 0.81
CNOT4O95628 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC20.12■□□□□ 0.81
CNOT4O95628 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CNOT4O95628 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CNOT4O95628 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
CNOT4O95628 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
CNOT4O95628 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
CNOT4O95628 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
CNOT4O95628 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
CNOT4O95628 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC20.11■□□□□ 0.81
CNOT4O95628 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CNOT4O95628 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
CNOT4O95628 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC20.11■□□□□ 0.81
CNOT4O95628 AL136116.3-201ENST00000402907 1138 ntBASIC20.11■□□□□ 0.81
CNOT4O95628 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC20.11■□□□□ 0.81
CNOT4O95628 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC20.11■□□□□ 0.81
CNOT4O95628 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CNOT4O95628 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CNOT4O95628 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CNOT4O95628 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CNOT4O95628 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC20.11■□□□□ 0.81
CNOT4O95628 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC20.11■□□□□ 0.81
CNOT4O95628 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
CNOT4O95628 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC20.11■□□□□ 0.81
CNOT4O95628 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
CNOT4O95628 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
CNOT4O95628 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC20.1■□□□□ 0.81
CNOT4O95628 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
CNOT4O95628 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CNOT4O95628 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CNOT4O95628 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CNOT4O95628 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC20.1■□□□□ 0.81
CNOT4O95628 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CNOT4O95628 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
CNOT4O95628 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
CNOT4O95628 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CNOT4O95628 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC20.1■□□□□ 0.81
CNOT4O95628 ALDH1A3-203ENST00000557963 1670 ntBASIC20.1■□□□□ 0.81
CNOT4O95628 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
CNOT4O95628 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
CNOT4O95628 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
CNOT4O95628 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CNOT4O95628 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
CNOT4O95628 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CNOT4O95628 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
CNOT4O95628 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CNOT4O95628 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CNOT4O95628 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CNOT4O95628 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC20.08■□□□□ 0.81
CNOT4O95628 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC20.08■□□□□ 0.81
CNOT4O95628 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CNOT4O95628 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CNOT4O95628 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC20.08■□□□□ 0.8
CNOT4O95628 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
CNOT4O95628 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CNOT4O95628 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC20.07■□□□□ 0.8
CNOT4O95628 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
CNOT4O95628 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
CNOT4O95628 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC20.07■□□□□ 0.8
CNOT4O95628 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC20.07■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms